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View Structure Prediction Details

Protein: CE33034
Organism: Caenorhabditis elegans
Length: 740 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33034.

Description E-value Query
Range
Subject
Range
AMPD2 - adenosine monophosphate deaminase 2 (isoform L)
721.0 [0..15] [738..128]

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Predicted Domain #1
Region A:
Residues: [1-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVDSELFD SGPFKKNFAF GNADHSTASP FEISTTPIEV NESRAHKTIE ISNRARLESQ  60
   61 NDGCLSPSSL KSVLDEIQTE PRCKSPQHID LHTFRDAVDV NYQRMAITGE ELSGVPLEDL 120
  121 KTASGHLIEA LHLRSKYMER IGNQFPSTTR NFLSGHYPAN LPKHRVKNTE TTVQTSFNPP 180
  181 DPPKDHWGKN DPLPKYEKIY HLRRNRGVTE ICNDDGSIDQ QFKNVNVTKE EFLNDTEKLT 240
  241 AMIVDGPLKS FCFRRLSYLE NKFQLHVLLN ELRELHEQKG VSHRDFYNIR KVDTHIHAAS 300
  301 SMNQKHLLRF IKKKIKTEAD TVVLNNNGTK VTMKEVFKKM GIDAYDLSVD MLDVHADRNT 360
  361 FHRFDKFNTK YNPVGESTLR EIFIKTDNYV GGKYFADLLK EVLSDLEDSK YQHAEPRLSI 420
  421 YGRSKNEWDN LAKWALTHDV WSPNARWLVQ IPRLYDVYRA KNMVKNFDDM LDNLFTPLFE 480
  481 VTNDPSSHPE LHLFLQQISG IDSVDDESKH EFVNFDRSTP CPPEYTDLEN PPYNYYLFYM 540
  541 YRNICALNAF RRARGLNTFA LRPHCGEAGH VSHLLTGYLT SESIAHGILL RKVPVLQYLY 600
  601 YLTQIGIAMS PLSNNSLFIS YQRNPLPEYL QKGLNVSLST DDPLQFHYTK EALMEEFSIA 660
  661 AQVWKLSSCD MCELARNSVM QSGFEDKVKI HWLGPNYKEE GVLGNDIHRT NVPDIRVSFR 720
  721 HEALVDELYN LFRVQNTLKQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 161.0
Match: 2a3lA
Description: X-Ray Structure of Adenosine 5'-Monophosphate Deaminase from Arabidopsis Thaliana in Complex with Coformycin 5'-Phosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.70199291046899 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.12925526582667 bayes_pls_golite062009
transcription regulator activity 0.867179877821333 bayes_pls_golite062009
nucleic acid binding 0.784495708118775 bayes_pls_golite062009
DNA binding 0.58985393219841 bayes_pls_golite062009
binding 0.568044210518453 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 0.248802326836448 bayes_pls_golite062009
hydrolase activity 0.24275130580417 bayes_pls_golite062009
dihydroorotase activity 0.203044795244555 bayes_pls_golite062009
deaminase activity 0.18698811376434 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.0954028693917728 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle