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View Structure Prediction Details

Protein: grk-2
Organism: Caenorhabditis elegans
Length: 707 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grk-2.

Description E-value Query
Range
Subject
Range
FBpp0311517, Gpr... - The gene G protein-coupled receptor kinase 1 is referred to in FlyBase by the symbol Dmel\Gprk1 (CG4...
557.0 [0..1] [684..1]

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Predicted Domain #1
Region A:
Residues: [1-707]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLEAVLAD VSYLMAMEKS RSQPAARASK RIVLPDPSVR SIMQKFLEKS GDMKFDKIFN  60
   61 QKLGFLLLKD YAENVSESPC PQIKFYEAIK EYEKMETPDE RLTKAREIYD HHIMVEMLAH 120
  121 AHNYSKESLQ HVQYHLLKQN VPPDLFHRYV LEICDQLRGD IFQRFLESDK FTRFCQWKNL 180
  181 ELNMQLTMND FSVHRIIGRG GFGEVYGCRK ADTGKMYAMK CLDKKRIKMK QGETLALNER 240
  241 IMLSLVSTGQ DCPFIVCMTY AFQSPDKLCF ILDLMNGGDL HYHLSQHGVF TEQEMIFYAS 300
  301 EVILGLEHMH NRFVVYRDLK PANILLDENG HVRVSDLGLA CDYSKKKPHA SVGTHGYMAP 360
  361 EVLAKGVAYD SSADWFSLGC MLYKLLKGHS PFRQHKSKDK NEIDKMTLTQ DIELPNEGLS 420
  421 KDCRDLLEGL LKRDVPDRLG CRGKGPTEVK EHPFFKDVDW QTVYLRRMTP PLIPPRGEVN 480
  481 AADAFDIGNF DDDEVKGVKL QDGDSDLYKN FNIVISERWQ NEIAETIFEV VNQDADKAES 540
  541 KKRSKQKIKV AVEEKDSDVI VHGYIKKLGG PFTSAWQTKY GKLYPSRLEL YPESLTAKPE 600
  601 LVFMDQIEDV CAEMQTIKGE TAIIVKLRDG FKEPKICLTN SDEISLKEWH TSLRTAHKVS 660
  661 QELLQRMGRK AIKIYGVNHD PMLSESERPG SVTRAFLNRA SSVDSGV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 153.0
Match: 1omwA
Description: G-protein coupled receptor kinase 2, N-terminal domain; G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1); G-protein coupled receptor kinase 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cyclic nucleotide-dependent protein kinase activity 4.97855712164511 bayes_pls_golite062009
insulin-like growth factor receptor binding 4.68588428747284 bayes_pls_golite062009
cAMP-dependent protein kinase activity 4.66277812893755 bayes_pls_golite062009
structural molecule activity 4.25992091947152 bayes_pls_golite062009
SH2 domain binding 4.2225235101534 bayes_pls_golite062009
actin binding 3.72754591832642 bayes_pls_golite062009
phosphoinositide 3-kinase binding 3.48970773098023 bayes_pls_golite062009
cytoskeletal protein binding 3.48744511411671 bayes_pls_golite062009
binding 3.29080729281876 bayes_pls_golite062009
insulin receptor activity 3.256741381527 bayes_pls_golite062009
protein binding 3.17213698546013 bayes_pls_golite062009
PTB domain binding 3.02789234463297 bayes_pls_golite062009
insulin receptor binding 2.87341016128079 bayes_pls_golite062009
tau-protein kinase activity 2.37138140221719 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
transcription regulator activity 2.10584700564436 bayes_pls_golite062009
actin filament binding 2.03444575838575 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 1.8384977631304 bayes_pls_golite062009
acetylcholine receptor activator activity 1.83545227594542 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
DNA binding 1.77960272183811 bayes_pls_golite062009
armadillo repeat domain binding 1.70850996351356 bayes_pls_golite062009
insulin receptor substrate binding 1.62657794525303 bayes_pls_golite062009
molecular transducer activity 1.55319485371003 bayes_pls_golite062009
signal transducer activity 1.55319485371003 bayes_pls_golite062009
nucleic acid binding 1.55295906221034 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.53043443218632 bayes_pls_golite062009
kinase activity 1.49733072352288 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.36365892826676 bayes_pls_golite062009
ErbB-3 class receptor binding 1.34841233233438 bayes_pls_golite062009
protein kinase activity 1.34246406302496 bayes_pls_golite062009
ErbB-2 class receptor binding 1.33825339298024 bayes_pls_golite062009
transporter activity 1.28986800087234 bayes_pls_golite062009
gamma-tubulin binding 1.28511591054866 bayes_pls_golite062009
brain-derived neurotrophic factor binding 1.28495809513039 bayes_pls_golite062009
insulin binding 1.23861703046323 bayes_pls_golite062009
receptor activity 1.1755016270537 bayes_pls_golite062009
enzyme binding 1.17212675145623 bayes_pls_golite062009
transmembrane receptor activity 1.1152029796159 bayes_pls_golite062009
transcription factor activity 1.10928254946881 bayes_pls_golite062009
phospholipid binding 1.09683218092034 bayes_pls_golite062009
Ran GTPase binding 1.07023555877478 bayes_pls_golite062009
transferase activity 1.05502123133116 bayes_pls_golite062009
receptor binding 1.00859318603128 bayes_pls_golite062009
receptor signaling protein activity 1.00400540041137 bayes_pls_golite062009
transmembrane transporter activity 0.97575992765505 bayes_pls_golite062009
oxidoreductase activity 0.965872107791437 bayes_pls_golite062009
kinase binding 0.961706066143 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.959360414036299 bayes_pls_golite062009
protein domain specific binding 0.90578029954417 bayes_pls_golite062009
JUN kinase kinase kinase kinase activity 0.886904175966993 bayes_pls_golite062009
growth factor binding 0.86076618871384 bayes_pls_golite062009
insulin-like growth factor II binding 0.856861384729301 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
substrate-specific transporter activity 0.79883446648737 bayes_pls_golite062009
phosphoinositide binding 0.71817045430443 bayes_pls_golite062009
structural constituent of muscle 0.70794260327482 bayes_pls_golite062009
protein kinase binding 0.67284191028382 bayes_pls_golite062009
profilin binding 0.66906205737225 bayes_pls_golite062009
protein serine/threonine kinase activity 0.611829373978789 bayes_pls_golite062009
Janus kinase activity 0.580310109637219 bayes_pls_golite062009
I-SMAD binding 0.568054578050901 bayes_pls_golite062009
protein complex binding 0.55916857709427 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.450699332958421 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
3-phosphoinositide-dependent protein kinase binding 0.372842462336059 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
mRNA binding 0.369721687873392 bayes_pls_golite062009
GTPase regulator activity 0.355387992614734 bayes_pls_golite062009
structural constituent of cytoskeleton 0.35466574267734 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.335498703113274 bayes_pls_golite062009
RNA binding 0.324381862881119 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase signaling protein activity 0.28468123649303 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.20643152368029 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.20643152368029 bayes_pls_golite062009
enzyme regulator activity 0.189879136353541 bayes_pls_golite062009
photoreceptor activity 0.187612589250841 bayes_pls_golite062009
ion transmembrane transporter activity 0.148194101970458 bayes_pls_golite062009
G-protein-coupled receptor binding 0.12466518799375 bayes_pls_golite062009
peptide binding 0.118578378753757 bayes_pls_golite062009
alpha-catenin binding 0.102004310679969 bayes_pls_golite062009
pyrophosphatase activity 0.0611639610381174 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.0524559849408587 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.0506751594607393 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.0498422520006935 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0040394359628233 bayes_pls_golite062009

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Created and Maintained by: Michael Riffle