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View Structure Prediction Details

Protein: CE29022
Organism: Caenorhabditis elegans
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29022.

Description E-value Query
Range
Subject
Range
gi|38564807 - gi|38564807|gb|AAR23825.1| dopa-decarboxylase [Antheraea pernyi]
432.0 [0..1] [509..1]

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Predicted Domain #1
Region A:
Residues: [1-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAKLRVEG KKMIEIVANY WDGIRTRKPI PDVKPGYIEK SVPSNPPTTP ESWEKVFGDL  60
   61 EKVIFNGSSH WNHPHFFAYF SAGIGYHSIL ADIISSGLGS VGFTWIACPP ITELEKITLD 120
  121 WLVDLTSLPV EFKNSHPGHG CGIIQSSASD STLIAIMTAR AAKVEFIKQN PSTFQWLINS 180
  181 TSEHLRSISY WTPVNRTIHD STDIITPYYH DPRVFKNFVM YFTDQAHSSV EKGAMLAGVR 240
  241 FRKLRSVRGY MENYEMDSKI LIDAIEQDRS RGFIPFMVAL TVGTTATCAA DDVEKIGQIC 300
  301 QKEGLYLHGA FAFCDEFKYL VNGLKYVDSY NTDLHKAGMI NFDCCPLWFK NGTYASRYYN 360
  361 VDPVYLAHEY QSSNMDYRHL EVPLGRRFRS LKVWFTMRNM GVEKIREYQR KTVSLALLFT 420
  421 KIIVEGDKFE LFTPPHLGMA TFRLKNHTNS DNERLLQAIN RDRRIHLGIS MVHGVYVLRF 480
  481 CVGSPLTNEE DVHFTKSVIF EIAHFLFEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1js3A
Description: DOPA decarboxylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.29878871754893 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 2.16315837695677 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 2.16315837695677 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
5-aminolevulinate synthase activity 1.01853440922526 bayes_pls_golite062009
transferase activity 0.737426388870721 bayes_pls_golite062009
carbon-sulfur lyase activity 0.698312655247044 bayes_pls_golite062009
cystathionine gamma-lyase activity 0.505859361763689 bayes_pls_golite062009
cystathionine beta-lyase activity 0.27933426619091 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 0.271623203801431 bayes_pls_golite062009
O-phospho-L-serine:2-oxoglutarate aminotransferase activity 0.234399054481664 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 0.130698724135981 bayes_pls_golite062009
carbon-carbon lyase activity 0.11598778799668 bayes_pls_golite062009
aromatic-L-amino-acid decarboxylase activity 0.10589462882093 bayes_pls_golite062009
binding 0.0138724523355769 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle