| Protein: | tax-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 733 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tax-4.
| Description | E-value | Query Range |
Subject Range |
|
|
345.0 | [0..1] | [677..32] |
|
Region A: Residues: [1-430] |
1 11 21 31 41 51
| | | | | |
1 MSTAEPAPDP TNPSTSGLAP TTNGIGSPPP TASAATKFSI LTKFLRRKNQ VHTTTAQQNE 60
61 FMQKYMPNGN SNAVQPAATG GQPASSDGGS AIEVPPPKES YAVRIRKYLA NYTQDPSTDN 120
121 FYYWTCVVTV AYIYNLLFVI ARQVFNDLIG PSSQSLCRFY NGTLNSTTQV ECTYNMLTNM 180
181 KEMPTYSQYP DLGWSKYWHF RMLWVFFDLL MDCVYLIDTF LNYRMGYMDQ GLVVREAEKV 240
241 TKAYWQSKQY RIDGISLIPL DYILGWPIPY INWRGLPILR LNRLIRYKRV RNCLERTETR 300
301 SSMPNAFRVV VVVWYIVIII HWNACLYFWI SEWIGLGTDA WVYGHLNKQS LPDDITDTLL 360
361 RRYVYSFYWS TLILTTIGEV PSPVRNIEYA FVTLDLMCGV LIFATIVGNV GSMISNMSAA 420
421 RTEFQNKMDG
|
| Detection Method: |  |
| Confidence: | 38.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [431-496] |
1 11 21 31 41 51
| | | | | |
1 IKQYMELRKV SKQLEIRVIK WFDYLWTNKQ SLSDQQVLKV LPDKLQAEIA MQVHFETLRK 60
61 VRIFQD
|
| Detection Method: | |
| Confidence: | 18.154902 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
|
Region A: Residues: [497-733] |
1 11 21 31 41 51
| | | | | |
1 CEAGLLAELV LKLQLQVFSP GDFICKKGDI GREMYIVKRG RLQVVDDDGK KVFVTLQEGS 60
61 VFGELSILNI AGSKNGNRRT ANVRSVGYTD LFVLSKTDLW NALREYPDAR KLLLAKGREI 120
121 LKKDNLLDEN APEEQKTVEE IAEHLNNAVK VLQTRMARLI VEHSSTEGKL MKRIEMLEKH 180
181 LSRYKALARR QKTMHGVSID GGDISTDGVD ERVRPPRLRQ TKTIDLPTGT ESESLLK
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1ne4A |
| Description: | Crystal Structure of Rp-cAMP Binding R1a Subunit of cAMP-dependent Protein Kinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclic nucleotide-gated ion channel activity | 10.1422916734545 | bayes_pls_golite062009 |
| intracellular cyclic nucleotide activated cation channel activity | 10.1422916734545 | bayes_pls_golite062009 |
| intracellular ligand-gated ion channel activity | 9.72053268940283 | bayes_pls_golite062009 |
| cation channel activity | 9.48749374439976 | bayes_pls_golite062009 |
| ion channel activity | 9.4846197809463 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 9.3929063879608 | bayes_pls_golite062009 |
| channel activity | 9.25176207085973 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 9.25176207085973 | bayes_pls_golite062009 |
| substrate-specific channel activity | 9.2472549851376 | bayes_pls_golite062009 |
| intracellular cGMP activated cation channel activity | 9.19973076787954 | bayes_pls_golite062009 |
| gated channel activity | 9.19042473454294 | bayes_pls_golite062009 |
| cGMP binding | 7.7575871125398 | bayes_pls_golite062009 |
| ligand-gated channel activity | 7.41584542512987 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 7.41584542512987 | bayes_pls_golite062009 |
| cyclic nucleotide binding | 7.37322432929433 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 6.57272328088253 | bayes_pls_golite062009 |
| voltage-gated channel activity | 6.54930851487319 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.54400173845933 | bayes_pls_golite062009 |
| GMP binding | 5.49455172024846 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.34760703274696 | bayes_pls_golite062009 |
| potassium channel activity | 5.29889968906368 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.1138025954757 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 4.96516802098805 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 4.52895684111035 | bayes_pls_golite062009 |
| intracellular cAMP activated cation channel activity | 3.95109938608832 | bayes_pls_golite062009 |
| transporter activity | 3.30740141256752 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.24402760485462 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.22443361822344 | bayes_pls_golite062009 |
| protein binding | 1.86347494944834 | bayes_pls_golite062009 |
| signal transducer activity | 1.7487659479534 | bayes_pls_golite062009 |
| molecular transducer activity | 1.7487659479534 | bayes_pls_golite062009 |
| binding | 1.59096092728475 | bayes_pls_golite062009 |
| transcription regulator activity | 1.52941414851886 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.40720858109605 | bayes_pls_golite062009 |
| nucleic acid binding | 1.33862527414723 | bayes_pls_golite062009 |
| DNA binding | 1.17942022803543 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.930640481652164 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.910527807644534 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.848189810874263 | bayes_pls_golite062009 |
| transcription factor activity | 0.720377542376114 | bayes_pls_golite062009 |
| transcription activator activity | 0.659469524274627 | bayes_pls_golite062009 |
