Protein: | ccf-1 |
Organism: | Caenorhabditis elegans |
Length: | 310 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ccf-1.
Description | E-value | Query Range |
Subject Range |
|
388.0 | [0..1] | [301..2] |
Region A: Residues: [1-310] |
1 11 21 31 41 51 | | | | | | 1 MASSSSGGAG GAGGASGAPE VKIHNVYMSN VEEEFARIRG FVEDYPYVAM DTEFPGVVAT 60 61 PLGTFRSKED FNYQQVFCNV NMLKLIQVGF AMVNDKGELP PTGDVWQFNF NFSFAEDMFS 120 121 HESVEMLRQA GIDFTLLQNN GIPTAVFGEL LTTSGLITDP RITWLTFSSG YDFGYLLKSI 180 181 TLGDLPKEES TFFMCHKTLF PTSFDIKILL RTPNCASAKL KGGLQEVADQ LDVKRQGVRH 240 241 QAGSDALLTA ATFFKIKKQF FGDNWNQIAP LICGHMFGLG SSLSLFHSSG STSRLGDETP 300 301 QGLIGVPQQA |
Detection Method: | |
Confidence: | 98.0 |
Match: | 2d5rA |
Description: | No description for 2d5rA was found. |
Term | Confidence | Notes |
ribonuclease activity | 5.30591758406946 | bayes_pls_golite062009 |
exoribonuclease activity | 3.71639182685131 | bayes_pls_golite062009 |
exoribonuclease activity, producing 5'-phosphomonoesters | 3.59362615133405 | bayes_pls_golite062009 |
3'-5'-exoribonuclease activity | 3.1992647486402 | bayes_pls_golite062009 |
nuclease activity | 3.11657409772275 | bayes_pls_golite062009 |
ribonuclease H activity | 2.91966688044755 | bayes_pls_golite062009 |
hydrolase activity | 2.78602644579272 | bayes_pls_golite062009 |
2.73492915653996 | bayes_pls_golite062009 | |
endonuclease activity | 2.63074055051349 | bayes_pls_golite062009 |
endoribonuclease activity | 2.59247838057313 | bayes_pls_golite062009 |
hydrolase activity, acting on ester bonds | 2.57498413015114 | bayes_pls_golite062009 |
transcription regulator activity | 2.20855917457806 | bayes_pls_golite062009 |
nucleic acid binding | 2.14285769817394 | bayes_pls_golite062009 |
exonuclease activity | 1.87925169250843 | bayes_pls_golite062009 |
DNA binding | 1.86594005896134 | bayes_pls_golite062009 |
3'-5' exonuclease activity | 1.44123900197846 | bayes_pls_golite062009 |
RNA binding | 1.43996903907704 | bayes_pls_golite062009 |
transcription activator activity | 1.43417601839369 | bayes_pls_golite062009 |
binding | 1.35497934205068 | bayes_pls_golite062009 |
general RNA polymerase II transcription factor activity | 1.32513822925426 | bayes_pls_golite062009 |
catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
transcription factor activity | 1.17659544650821 | bayes_pls_golite062009 |
protein binding | 1.08578027658199 | bayes_pls_golite062009 |
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.71760273606768 | bayes_pls_golite062009 |
endoribonuclease activity, producing 5'-phosphomonoesters | 0.708753843279937 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 0.615788727884275 | bayes_pls_golite062009 |
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.598360955770972 | bayes_pls_golite062009 |
deoxyribonuclease activity | 0.24906263529692 | bayes_pls_golite062009 |
DNA-directed DNA polymerase activity | 0.09423425042945 | bayes_pls_golite062009 |
DNA polymerase activity | 0.0189279348688405 | bayes_pls_golite062009 |