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View Structure Prediction Details

Protein: dpf-1
Organism: Caenorhabditis elegans
Length: 799 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpf-1.

Description E-value Query
Range
Subject
Range
gi|39580076, gi|... - gi|39580076|emb|CAE56836.1| Hypothetical protein CBG24661 [Caenorhabditis briggsae], gi|187039951|em...
444.0 [0..1] [799..1]

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Predicted Domain #1
Region A:
Residues: [1-799]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEADLLEG YDEELGGNES QKRDCKGITT AIVVVLLILV MIFAALVFFT PLFAAKSFGS  60
   61 WRLNVSDLRS LRYPYAEFAF TDNNAVVMQS WEGVEIVEDG VSRLIFGREN GAEITPSADR 120
  121 KYFAMMDHAP NPGMNPQNET FHLKIVNNNE RLNPLLPFEV EELFRELSDS RITYDIGLRK 180
  181 EESVIQAFKW NGKFNDFVFV ESNKIYYQSS PEEEGLTRVS NGGEHTVDGL FDWIYEEEIF 240
  241 GRKDAMWWST KGDQLAYASY DNHLTKNVSL KTYHRLEPYP IDTNFHYPKT FAKVLPTYTL 300
  301 SIWNKKTEQS RQLDVQLKDS LSYHYLLAVK WLEINGTEQL VSVWTNRYQN EVALTICDWD 360
  361 TAICRLEFEY KYASKRWVTH DDFHSITSFE DTLFFLLPHD KRDNAFQQVA SLRLSHGQLR 420
  421 TPKFLNLGEY DVTSINGINK ETRTIFFHAA APKPSHRSLF SYSLADESRN SAYCISCSIK 480
  481 NCTWAQAQMD DQMKTAIVSC KGPAAPHTAI VNLTRMDSDK KTEHANLLYD KTYQNRVEEA 540
  541 GLPVIIKETI KISDDFDALI KLSIPKDIYN RDKHQAIPLI VHVYGGPNDQ NTKEATQIGI 600
  601 EEVVASASQA AILRIDGRGS GGRGWKYRSA IYGQLGTVEV EDQIKAIKVV LRLYRHLLDA 660
  661 RRVAVFGWSY GGFMTLSMVN EAPEQFFKCA VSVAPVTNFA YYDATYTERY MGDAPLESYS 720
  721 DVTKKLDNFK STRLLLMHGL LDDNVHFQNS AILIDELQNR GVDFDLMVYP NQAHSLSSRT 780
  781 SHVVGKMTHF LRQCFYTDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.522879
Match: 1xfdA
Description: Structure of a human A-type Potassium Channel Accelerating factor DPPX, a member of the dipeptidyl aminopeptidase family
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.57964722344477 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.16972200137283 bayes_pls_golite062009
hydrolase activity 2.08794727037654 bayes_pls_golite062009
binding 1.65984898603901 bayes_pls_golite062009
collagen binding 1.49001416226599 bayes_pls_golite062009
exopeptidase activity 1.36397817334992 bayes_pls_golite062009
dipeptidyl-peptidase activity 1.1571701944834 bayes_pls_golite062009
catalytic activity 1.00900109067915 bayes_pls_golite062009
protein binding 0.79136605420755 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle