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View Structure Prediction Details

Protein: dpf-1
Organism: Caenorhabditis elegans
Length: 779 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpf-1.

Description E-value Query
Range
Subject
Range
gi|2135003, gi|3... - gi|306708|gb|AAA35761.1| dipeptidyl aminopeptidase like protein, gi|2135003|pir||I68600 dipeptidyl a...
436.0 [0..2] [775..8]

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Predicted Domain #1
Region A:
Residues: [1-779]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEADLLEG YDEELGGNES QKRDCKGITT AIVVVLLILV MIFAALVFFT PLFAAKSFGS  60
   61 WRLNVSDLRS LRYPYAEFAF TDNNAVVMQS WEGVEIVEDG VSRLIFGREN GAEITPSADR 120
  121 KYFAMMDHAP NPGMNPQNET FHLKIVNNNE RITYDIGLRK EESVIQAFKW NGKFNDFVFV 180
  181 ESNKIYYQSS PEEEGLTRVS NGGEHTVDGL FDWIYEEEIF GRKDAMWWST KGDQLAYASY 240
  241 DNHLTKNVSL KTYHRLEPYP IDTNFHYPKT FAKVLPTYTL SIWNKKTEQS RQLDVQLKDS 300
  301 LSYHYLLAVK WLEINGTEQL VSVWTNRYQN EVALTICDWD TAICRLEFEY KYASKRWVTH 360
  361 DDFHSITSFE DTLFFLLPHD KRDNAFQQVA SLRLSHGQLR TPKFLNLGEY DVTSINGINK 420
  421 ETRTIFFHAA APKPSHRSLF SYSLADESRN SAYCISCSIK NCTWAQAQMD DQMKTAIVSC 480
  481 KGPAAPHTAI VNLTRMDSDK KTEHANLLYD KTYQNRVEEA GLPVIIKETI KISDDFDALI 540
  541 KLSIPKDIYN RDKHQAIPLI VHVYGGPNDQ NTKEATQIGI EEVVASASQA AILRIDGRGS 600
  601 GGRGWKYRSA IYGQLGTVEV EDQIKAIKVV LRLYRHLLDA RRVAVFGWSY GGFMTLSMVN 660
  661 EAPEQFFKCA VSVAPVTNFA YYDATYTERY MGDAPLESYS DVTKKLDNFK STRLLLMHGL 720
  721 LDDNVHFQNS AILIDELQNR GVDFDLMVYP NQAHSLSSRT SHVVGKMTHF LRQCFYTDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.69897
Match: 1xfdA
Description: Structure of a human A-type Potassium Channel Accelerating factor DPPX, a member of the dipeptidyl aminopeptidase family
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.57964722344477 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.16972200137283 bayes_pls_golite062009
hydrolase activity 2.08794727037654 bayes_pls_golite062009
binding 1.65984898603901 bayes_pls_golite062009
collagen binding 1.49001416226599 bayes_pls_golite062009
exopeptidase activity 1.36397817334992 bayes_pls_golite062009
dipeptidyl-peptidase activity 1.1571701944834 bayes_pls_golite062009
catalytic activity 1.00900109067915 bayes_pls_golite062009
protein binding 0.79136605420755 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle