YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: bli-4
Organism: Caenorhabditis elegans
Length: 670 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bli-4.

Description E-value Query
Range
Subject
Range
bli-4 - endoprotease status:Confirmed UniProt:P51559 protein_id:AAB96754.1
493.0 [0..1] [667..1]

Back

Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISIGRIAW QILAVLIAVA FTIEHDSICD ESIGACGEPI HTVIRLAKRD DELARRIAAD  60
   61 HDMHVKGDPF LDTHYFLYHS ETTRTRRHKR AIVERLDSHP AVEWVEEQRP KKRVKRDYIL 120
  121 LDNDVHHSNP FRRSVLNRDG TRRAQRQQPQ SPREIPSLPF PDPLYKDQWY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [171-670]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHGGAVGGYD MNVRQAWLQG YAGRNVSVSI LDDGIQRDHP DLAANYDPLA STDINDHDDD  60
   61 PTPQNNGDNK HGTRCAGEVA ALAGNNQCGV GVAFKAKIGG VRMLDGAVSD SVEAASLSLN 120
  121 QDHIDIYSAS WGPEDDGKTF DGPGPLAREA FYRGIKNGRG GKGNIFVWAS GNGGSRQDSC 180
  181 SADGYTTSVY TLSISSATYD NHRPWYLEEC PSSIATTYSS ADFRQPAIVT VDVPGGCTDK 240
  241 HTGTSASAPL AAGIIALALE ANPELTWRDM QHLVLRTANW KPLENNPGWS RNGVGRMVSN 300
  301 KFGYGLIDGG ALVNMAKTWK TVPEQHICTY EYRLANPNPR PIVGRFQLNF TLDVNGCESG 360
  361 TPVLYLEHVQ VHATVRYLKR GDLKLTLFSP SGTRSVLLPP RPQDFNANGF HKWPFLSVQQ 420
  421 WGEDPRGTWL LMVESVTTNP AATGTFHDWT LLLYGTADPA QSGDPVYSAT PATSQGVLSR 480
  481 VHQLTSQILI TIAIHLVVNA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.30103
Match: 1p8jA
Description: Furin, C-terminal domain; Furin, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 4.77677490610016 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 4.40501322467328 bayes_pls_golite062009
serine hydrolase activity 4.30899317351154 bayes_pls_golite062009
serine-type peptidase activity 4.29545891350519 bayes_pls_golite062009
nerve growth factor binding 3.93556598541015 bayes_pls_golite062009
endopeptidase activity 3.83336601331518 bayes_pls_golite062009
serine-type endopeptidase activity 3.71508033196614 bayes_pls_golite062009
neurotrophin binding 2.36320382357038 bayes_pls_golite062009
hydrolase activity 2.05732080397524 bayes_pls_golite062009
eukaryotic cell surface binding 1.50287724152407 bayes_pls_golite062009
binding 1.08901362883653 bayes_pls_golite062009
catalytic activity 0.597535457699629 bayes_pls_golite062009
exopeptidase activity 0.42083764849682 bayes_pls_golite062009
protein binding 0.380935140681308 bayes_pls_golite062009
receptor binding 0.222369968782666 bayes_pls_golite062009
glycosaminoglycan binding 0.11649614154172 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle