| Protein: | CE08947 |
| Organism: | Caenorhabditis elegans |
| Length: | 590 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08947.
| Description | E-value | Query Range |
Subject Range |
|
|
713.0 | [0..26] | [588..103] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MKTVRFNKQA LAILAACFIF LLCVVCYFSA SSESHNAVVV GERARGHIAV RDVENRHLAE 60
61 EKHAVIHAKT VGKIERVVSQ EKVEILRPAR VESKPPGEKT STEPEETGVG KAPIQTSEGL 120
121 E
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [122-590] |
1 11 21 31 41 51
| | | | | |
1 KLIGKIHYEN KDEENDLRRQ KVKEMMIHAW EGYKNYSWGA NELRPMSKKP NSQNIFGGSQ 60
61 MPATIVDAAD TLFIMDLKDK YKEARDYIEN NFSMAKSTST LSVFETTIRF LGGLLSLYAL 120
121 TQESFYIEKA REVGEALLPA FNTPSGIPKS NLDVASKHAS NYGWANGGQS ILSEIGSLHL 180
181 EFLYLSRISN APIFEKKVKK VRDALEKAEK PNGLYSNYIN PDTGKFTGSH MSLGALGDSF 240
241 YEYLIKSYVQ SNYTDTQAKN MYWDVSDAIQ KHMIKVSKQS NLTYTVELNN GQAQHKMGHL 300
301 ACFVPGMFAL QAINEDTEEE KLRIMTLAEE LAKTCHESYI RSETHIGPEM FYFNERDEAT 360
361 SKHSENGYIQ RPEVIEGWFY LWRLTGKTMY RDWVWDAVQA IEKYCRVDSG FTGLQNVYNP 420
421 KAGREDVMQS FFLAEFLKYA YLTFADESLI SLDKWVFNTE AHPVPVLTN
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1nxcA |
| Description: | Structure of mouse Golgi alpha-1,2-mannosidase IA reveals the molecular basis for substrate specificity among Class I enzymes (family 47 glycosidases) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| mannosyl-oligosaccharide mannosidase activity | 7.089685350864 | bayes_pls_golite062009 |
| mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 6.95179264736435 | bayes_pls_golite062009 |
| mannosidase activity | 5.20286438265852 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 4.31319275372149 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 3.65589746311782 | bayes_pls_golite062009 |
| hydrolase activity | 2.67964748309919 | bayes_pls_golite062009 |
| binding | 1.49199031708525 | bayes_pls_golite062009 |
| catalytic activity | 1.31873306707813 | bayes_pls_golite062009 |
| cation binding | 0.362242764130218 | bayes_pls_golite062009 |
| metal ion binding | 0.362242764130218 | bayes_pls_golite062009 |
| protein binding | 0.36081692928767 | bayes_pls_golite062009 |
| ion binding | 0.355220167272296 | bayes_pls_golite062009 |
| calcium ion binding | 0.121126738064555 | bayes_pls_golite062009 |
