| Protein: | ran-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 133 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ran-4.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..1] | [133..1] |
|
|
175.0 | [0..1] | [133..1] |
|
|
175.0 | [0..1] | [133..1] |
|
|
173.0 | [0..1] | [133..1] |
|
|
172.0 | [0..1] | [133..1] |
|
|
171.0 | [0..1] | [133..1] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MSFNPDYESV AKAFIQHYYS KFDVGDGMSR AQGLSDLYDP ENSYMTFEGQ QAKGRDGILQ 60
61 KFTTLGFTKI QRAITVIDSQ PLYDGSIQVM VLGQLKTDED PINPFSQVFI LRPNNQGSYF 120
121 IGNEIFRLDL HNN
|
| Detection Method: |  |
| Confidence: | 42.0 |
| Match: | 1a2kA |
| Description: | Nuclear transport factor-2 (NTF2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 3.2858716221712 | bayes_pls_golite062009 |
| nucleocytoplasmic transporter activity | 2.57260151088345 | bayes_pls_golite062009 |
| binding | 2.32562999055027 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.22367856601071 | bayes_pls_golite062009 |
| transporter activity | 1.80701285041353 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.33804818542017 | bayes_pls_golite062009 |
| structural constituent of nuclear pore | 1.30758304562723 | bayes_pls_golite062009 |
| protein binding | 1.24260899146543 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.22102896992563 | bayes_pls_golite062009 |
| Ran GTPase binding | 1.18290069522408 | bayes_pls_golite062009 |
| RNA binding | 1.05240446104847 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.890150150408175 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.79772386064313 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.79772386064313 | bayes_pls_golite062009 |
| nucleic acid binding | 0.688410645367506 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.446562877324676 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.439519001457896 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.430285640125175 | bayes_pls_golite062009 |
