YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE03011
Organism: Caenorhabditis elegans
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03011.

Description E-value Query
Range
Subject
Range
gi|13384746, gi|... - gi|13384746|ref|NP_079647.1| aminoacylase 1 [Mus musculus], gi|12834533|dbj|BAB22948.1| unnamed prot...
300.0 [0..4] [398..9]

Back

Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEHIAVTR FREYLRVNTE QPNPDYAACR DFLFKYADEL GIARRSFETV PGAIFVIMTI  60
   61 PGSQPELPSI MLYSHTDVVP TFREHWTHDP YSAFKDEDGN IFARGAQDMK CVGVQQMEAL 120
  121 RNLFAQGIRQ WKRTIHLVWG PDEEIFGING MKGFAKTDEF KKLNLGFSLD EGMPSDDDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1q7lA
Description: Zn-binding domain of the T347G mutant of human aminoacylase-I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.81939870413022 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.44941516786903 bayes_pls_golite062009
hydrolase activity 2.78642767439288 bayes_pls_golite062009
exopeptidase activity 1.62986226691096 bayes_pls_golite062009
catalytic activity 1.3989281287879 bayes_pls_golite062009
metallopeptidase activity 1.19468588994762 bayes_pls_golite062009
carboxypeptidase activity 0.891655769761122 bayes_pls_golite062009
metalloexopeptidase activity 0.53612355623424 bayes_pls_golite062009
metallocarboxypeptidase activity 0.180859448845431 bayes_pls_golite062009
aminopeptidase activity 0.0966237570696103 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [180-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YKVFYAERVA WWVKVTFPGN PGHGSQFMEN TAMEKLERYL ASARKFRDEQ KALLESNPDL  60
   61 TIGDVTTLNV NIVNGGVQFN VIPEKFEAFV DIRLTPSIDF NEMRNKLDQW VKDAGEGVTY 120
  121 EFSKHSDLKL VT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.11
Match: 1ysjA
Description: Crystal Structure of Bacillus Subtilis YXEP Protein (APC1829), a Dinuclear Metal Binding Peptidase from M20 Family
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.2460337099697 bayes_pls_golite062009
hydrolase activity 2.89801951009786 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.58805472741431 bayes_pls_golite062009
catalytic activity 1.84228605319441 bayes_pls_golite062009
exopeptidase activity 0.574424638244179 bayes_pls_golite062009
binding 0.477837256878116 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [312-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHTRDDPFWV AFEDSLKQEK CKFTTEVLIG STDSRIVREA GVRAINFSPL INTPLLAHAH  60
   61 NEFLNEKVFL RGIEIYQTLI NNVANVNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.09691
Match: 1q7lB
Description: Zn-binding domain of the T347G mutant of human aminoacylase-I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle