YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE02935
Organism: Caenorhabditis elegans
Length: 634 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02935.

Description E-value Query
Range
Subject
Range
gi|7436698 - pir||C70341 acetolactate synthase (EC 4.1.3.18) large chain - Aquifex aeolicus
gi|15605942, gi|... - gi|2983101|gb|AAC06706.1| acetolactate synthase large subunit [Aquifex aeolicus VF5], gi|15605942|re...
619.0 [0..69] [634..1]

Back

Predicted Domain #1
Region A:
Residues: [1-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLQKMFQS FCRVFGGRSV SLLVRRSQFS FAPQRGLISV IDKQQCRQIT DYSAKDSRIN  60
   61 SRKLRNHDGS NMDGASITAA ALKSQGVEYM FGVVGFPVIE VGMAAQAHGI KYIGCRNEQA 120
  121 AAYAAQAMGY LTGKPVALLV VSGPGILHAI GGLANATVNC WPVVCIGGTA DVDLENRGAF 180
  181 QEWSQQESVR NSCKHVSRPT SLHTIPAHIE KAVRCAMYGR PGAVYVDLPG NLVLTSTEEE 240
  241 ISFPPQVPLP APVSIPPIAE IEKAIDTLKS AKKPLVIVGK GAAWSERGAT QVQQFLTKSK 300
  301 LPWLATPGGK GVASDLHPRF IGQARSLALR EADTVFLIGA RFNWILHFGL PPRFQKDVKV 360
  361 VQIDICPEEF HQNVKTEVPL LGDIGETLAE LTPRLGDWTY DESTEWFKKL RENAEKNRAA 420
  421 VEKFVDDHST PLNYYAAYQP IREFLANNDV IVINEGANTM DIGRTMMPSR LPKRRLDAGT 480
  481 FGTMGVGHGF SLAAALWARD HSPKTKVLVV QGDSAFGFSA MELETIARYN LPVVTVIINN 540
  541 SGIYRGLLPE DDKAIEGDRT LALPVLSLTA ECRYEEMCKA FGGAGTVVRT VPEIKAALEK 600
  601 AFQKTDGPTV INALISTDSE RKPQADHWLT RSKM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.522879
Match: 2c31A
Description: CRYSTAL STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH THE COFACTOR DERIVATIVE THIAMIN-2-THIAZOLONE DIPHOSPHATE AND ADENOSINE DIPHOSPHATE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 12.903449876837 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.3239025230705 bayes_pls_golite062009
pyruvate dehydrogenase activity 5.28857071459273 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 5.21233670052586 bayes_pls_golite062009
pyruvate dehydrogenase (acetyl-transferring) activity 5.08663245333808 bayes_pls_golite062009
catalytic activity 2.25537597692103 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.15444163802756 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 1.98546381612935 bayes_pls_golite062009
thiamin pyrophosphate binding 1.87247313698582 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.82969293063325 bayes_pls_golite062009
deoxyhypusine synthase activity 1.46517585302326 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 1.0611726850452 bayes_pls_golite062009
protein deacetylase activity 1.00103393476979 bayes_pls_golite062009
histone deacetylase activity 0.99977365092061 bayes_pls_golite062009
cation transmembrane transporter activity 0.78591260444574 bayes_pls_golite062009
transketolase activity 0.762352619346583 bayes_pls_golite062009
binding 0.551586872853971 bayes_pls_golite062009
hydrolase activity 0.536729211484905 bayes_pls_golite062009
ion transmembrane transporter activity 0.51426028502998 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.492590326775569 bayes_pls_golite062009
oxidoreductase activity 0.459800433209317 bayes_pls_golite062009
transferase activity 0.413024577830522 bayes_pls_golite062009
NAD-dependent histone deacetylase activity 0.38348854354211 bayes_pls_golite062009
NAD-dependent protein deacetylase activity 0.38348854354211 bayes_pls_golite062009
deacetylase activity 0.382228826641711 bayes_pls_golite062009
transcription regulator activity 0.273969473413919 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.114062221123972 bayes_pls_golite062009
nucleic acid binding 0.0424046736878951 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle