| Protein: | ldh-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 333 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ldh-1.
| Description | E-value | Query Range |
Subject Range |
|
|
381.0 | [0..1] | [331..30] |
|
Region A: Residues: [1-333] |
1 11 21 31 41 51
| | | | | |
1 MASTIKEVFA EIAAPVENSH GKVTVVGVGQ VGMACAYSIL QQNLANELCL VDVVADKLKG 60
61 EMMDLQHGLA FTRHCTVKAD TDYSITAGSK LCVVTAGARQ REGETRLSLV QRNVEIFKGI 120
121 IPQLVKYSPD TCILVVSNPV DVLTYVTWKL SGLPRERVFG SGTNLDSARF RFLLSEKLNI 180
181 APSSCHGWII GEHGDSSVAV WSGVNVAGVT LHEIKPDIGE KTDNEHWEAE IHKKVVDSAY 240
241 EIIKLKGYTS WAIGLSVAKI AQGIFSNSRN VFALSTNVKG FHGINDDVYL SLPVVLGSAG 300
301 LTHVVKQQLT EAEVQKLHNS AKALLEVQNG IVM
|
| Detection Method: |  |
| Confidence: | 104.0 |
| Match: | 1i10A |
| Description: | Lactate dehydrogenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-lactate dehydrogenase activity | 2.59062377380589 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| alcohol dehydrogenase (NAD) activity | 1.27032644348698 | bayes_pls_golite062009 |
| retinol dehydrogenase activity | 1.16811519855038 | bayes_pls_golite062009 |
| binding | 0.982999356179965 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.9367410227151 | bayes_pls_golite062009 |
| NAD or NADH binding | 0.74536049628503 | bayes_pls_golite062009 |
| alcohol dehydrogenase activity, zinc-dependent | 0.729242797855749 | bayes_pls_golite062009 |
| fatty acid synthase activity | 0.714637370305282 | bayes_pls_golite062009 |
| DNA binding | 0.525227236870065 | bayes_pls_golite062009 |
| protein binding | 0.507836099271263 | bayes_pls_golite062009 |
| nucleic acid binding | 0.459537641913493 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 0.418775403210681 | bayes_pls_golite062009 |
| coenzyme binding | 0.35922330382799 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.32207755075663 | bayes_pls_golite062009 |
| 3-oxoacyl-[acyl-carrier-protein] reductase activity | 0.192594057004213 | bayes_pls_golite062009 |
| transcription regulator activity | 0.177044638410302 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0433763403499039 | bayes_pls_golite062009 |
| signal transducer activity | 0.0433763403499039 | bayes_pls_golite062009 |
