| Protein: | rsp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 494 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rsp1.
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..1] | [484..1] |
|
|
284.0 | [0..7] | [390..1] |
|
|
273.0 | [0..7] | [390..1] |
|
|
263.0 | [0..7] | [392..1] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MARTAFHDEF VDYYTILGAE STSSYVEIRQ QYLKLVLRYH PDRNPGREAE VLPQFQLIQK 60
61 AHEVLKDPKL RELFDQRRLL EAGRPDGVLR FRPKKSGPKN DISTKVASKV SVTMATKFAE 120
121
|
| Detection Method: |  |
| Confidence: | 27.0 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Hsp70 protein binding | 3.46294021814538 | bayes_pls_golite062009 |
| binding | 2.0541759325193 | bayes_pls_golite062009 |
| protein binding | 1.63230390088325 | bayes_pls_golite062009 |
| unfolded protein binding | 0.4305700213258 | bayes_pls_golite062009 |
| heat shock protein binding | 0.155856464533709 | bayes_pls_golite062009 |
| transporter activity | 0.00329162947793138 | bayes_pls_golite062009 |
|
Region A: Residues: [121-317] |
1 11 21 31 41 51
| | | | | |
1 KKKKQDRENV DSKDNNITNF SLHRSFSASG KMEKNNSFKE VSTSKSYISS GYLHPKTSPI 60
61 FKKNGYATEN VVDPISSSPR FKGPNYNKFN AKLYLESLRE KRRTYTPLSE ISNGLNSNGV 120
121 ENSSITKSSP RSSSSSNNER FKDTSEESII FTSPNTPEHP SVYQTDITPE IKLEHSDNNS 180
181 PSKPEIPFRH PTSKPLP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [318-494] |
1 11 21 31 41 51
| | | | | |
1 PKPLSRSKSS SLSRNQTRSQ LNDLSAENDS TSNSTEYDDQ LQSILRSLAI EGDDDEVAKV 60
61 LPKPPSVPTI QAPIPPEAPR NLTNASVDSY LNSFEMYQRR WSSYSIIYTQ YAFQWQIFKN 120
121 KCFQLDLMNT PGQSRLIDNW KEGSQAIQLF YAYEQMHLRA LEELQSLKES LFASFGI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
