Protein: | rsp1 |
Organism: | Schizosaccharomyces pombe |
Length: | 494 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rsp1.
Description | E-value | Query Range |
Subject Range |
|
326.0 | [0..1] | [484..1] |
|
284.0 | [0..7] | [390..1] |
|
273.0 | [0..7] | [390..1] |
|
263.0 | [0..7] | [392..1] |
Region A: Residues: [1-120] |
1 11 21 31 41 51 | | | | | | 1 MARTAFHDEF VDYYTILGAE STSSYVEIRQ QYLKLVLRYH PDRNPGREAE VLPQFQLIQK 60 61 AHEVLKDPKL RELFDQRRLL EAGRPDGVLR FRPKKSGPKN DISTKVASKV SVTMATKFAE 120 121 |
Detection Method: | |
Confidence: | 27.0 |
Match: | 1xblA |
Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
Hsp70 protein binding | 3.46294021814538 | bayes_pls_golite062009 |
binding | 2.0541759325193 | bayes_pls_golite062009 |
protein binding | 1.63230390088325 | bayes_pls_golite062009 |
unfolded protein binding | 0.4305700213258 | bayes_pls_golite062009 |
heat shock protein binding | 0.155856464533709 | bayes_pls_golite062009 |
transporter activity | 0.00329162947793138 | bayes_pls_golite062009 |
Region A: Residues: [121-317] |
1 11 21 31 41 51 | | | | | | 1 KKKKQDRENV DSKDNNITNF SLHRSFSASG KMEKNNSFKE VSTSKSYISS GYLHPKTSPI 60 61 FKKNGYATEN VVDPISSSPR FKGPNYNKFN AKLYLESLRE KRRTYTPLSE ISNGLNSNGV 120 121 ENSSITKSSP RSSSSSNNER FKDTSEESII FTSPNTPEHP SVYQTDITPE IKLEHSDNNS 180 181 PSKPEIPFRH PTSKPLP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [318-494] |
1 11 21 31 41 51 | | | | | | 1 PKPLSRSKSS SLSRNQTRSQ LNDLSAENDS TSNSTEYDDQ LQSILRSLAI EGDDDEVAKV 60 61 LPKPPSVPTI QAPIPPEAPR NLTNASVDSY LNSFEMYQRR WSSYSIIYTQ YAFQWQIFKN 120 121 KCFQLDLMNT PGQSRLIDNW KEGSQAIQLF YAYEQMHLRA LEELQSLKES LFASFGI |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.