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View Structure Prediction Details

Protein: bgl2
Organism: Schizosaccharomyces pombe
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bgl2.

Description E-value Query
Range
Subject
Range
gi|22550395, gi|... - gi|22550395|gb|AAF44667.2|AF239617_1 beta-1,3-glucanase [Vitis vinifera], gi|225431926|ref|XP_002277...
251.0 [0..20] [321..1]
gi|16903144 - gi|16903144|gb|AAL30426.1|AF435089_1 beta-1,3-glucanase [Prunus persica]
249.0 [0..12] [319..1]
gi|4883425 - gi|4883425|emb|CAA10287.2| glucan-endo-1,3-beta-glucosidase [Cicer arietinum]
247.0 [0..13] [321..6]
E13B_PEA - Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1
245.0 [0..19] [321..11]
gi|115442219, gi... - gi|115442219|ref|NP_001045389.1| Os01g0947700 [Oryza sativa (japonica cultivar-group)], gi|113534920...
245.0 [0..38] [319..320]
gi|87240467, gi|... - gi|92895972|gb|ABE92980.1| Glycoside hydrolase, family 17 [Medicago truncatula], gi|87240467|gb|ABD3...
244.0 [0..18] [321..3]
gi|124294783, gi... - gi|124294783|gb|ABN03965.1| beta-1,3-glucanase [Hevea brasiliensis], gi|110085241|gb|ABG49448.1| bet...
244.0 [0..20] [321..16]
E132_SOLTU - Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1
244.0 [0..17] [319..2]

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Predicted Domain #1
Region A:
Residues: [1-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFLSSFVFA ALALLPLSAM AVDEAASEIA SSTKPASTNG TLSFCLGVKH ADGTCKYTDD  60
   61 YLADFEVLAP YTNMIRTYAT SDCNTLEYLL PALAQSPYNF SAILGVWPTD DAHYDLEKQA 120
  121 LMQYLPQYGV DHVRAITVGS EVLYRNDLPA DVLAERIYDV RGLVQQKLGF DVPVGTADSW 180
  181 NLWAGGSGDV VITASDFIMS NDFPYWQGQN TSNMTNTFIS DTLAALERVQ SVKGTNNVTF 240
  241 WVGETGWPTD GPSYGEADAT VDIASEFFQE ALCNIRRKGI DIFFFEAFDE DWKGDSSSVE 300
  301 PYFGAMYSNR TLKYNLNCTS E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 2cygA
Description: Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 5.69053704525182 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 5.36248919165223 bayes_pls_golite062009
glucan 1,3-beta-glucosidase activity 5.16200085143699 bayes_pls_golite062009
chitinase activity 4.23468626179609 bayes_pls_golite062009
hydrolase activity 4.05312354194822 bayes_pls_golite062009
glucosidase activity 3.69195576225095 bayes_pls_golite062009
beta-glucosidase activity 3.14931331494576 bayes_pls_golite062009
alpha-amylase activity 2.09193270404736 bayes_pls_golite062009
amylase activity 2.03484942782894 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
hexosaminidase activity 1.26857012744249 bayes_pls_golite062009
carbohydrate binding 1.01605349309551 bayes_pls_golite062009
binding 0.442009020636084 bayes_pls_golite062009
pattern binding 0.387048693138881 bayes_pls_golite062009
protein binding 0.105573220180415 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle