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View Structure Prediction Details

Protein: set8
Organism: Schizosaccharomyces pombe
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for set8.

Description E-value Query
Range
Subject
Range
SETD3 - SET domain containing 3
284.0 [0..4] [425..82]
gi|114654683 - gi|114654683|ref|XP_522946.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
284.0 [0..4] [425..82]
gi|109084840 - gi|109084840|ref|XP_001103370.1| PREDICTED: similar to SET domain containing 3 isoform 3 [Macaca mul...
284.0 [0..4] [425..82]
SETD3_MOUSE - Histone-lysine N-methyltransferase setd3 OS=Mus musculus GN=Setd3 PE=1 SV=1
280.0 [0..4] [425..82]
gi|149044195, gi... - gi|149044195|gb|EDL97577.1| rCG27725, isoform CRA_a [Rattus norvegicus], gi|109479948|ref|XP_0010691...
279.0 [0..4] [425..82]
gi|73964462 - gi|73964462|ref|XP_547974.2| PREDICTED: similar to CG32732-PA [Canis familiaris]
278.0 [0..4] [425..82]
gi|110331827 - gi|110331827|gb|ABG67019.1| hypothetical protein LOC84193 [Bos taurus]
270.0 [0..4] [419..89]

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Predicted Domain #1
Region A:
Residues: [1-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIKYNELVN QFAPGAKQIT IKKIRKKGNG IFSLNRYTSG TVLLEVPLEN IICRKTVEQF  60
   61 RNSCDKFASI ATLEEWNDMS FRTQAMLFLC YLWLGIQPRT NKWDKFLTVL PLSINTPAQW 120
  121 PEKEVYSLQG TSIFNPVCVK RKILQQEWLS LNQRYSDSWP SKITLPKWVH ADALFHSRCL 180
  181 ESPFKDPVLA PVIDLCNHSS KSNAKWSFSE DAMQLYLDKD IDENEEVTIN YGSEKGSAEF 240
  241 LFSYGFLPEP EGDRITNVMK LLIPEDSNDS LDLAKRRSCK TPPMIEFVSD SSGELWWHAP 300
  301 FLFFSVLNVE DFTNFKMVCD ESKAQTVDWE FEGQKCSVED LPKLVQLSPK RDLYILRVFC 360
  361 LAEQLADAAL NTNIENMYNP TERRSESVEL LKRESFLLKK VLLYLRDVIS KLLKSKVVVE 420
  421 FIHSQTIES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.0
Match: 1mlvA
Description: RuBisCo LSMT C-terminal, substrate-binding domain; RuBisCo LSMT catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
histone methyltransferase activity 6.20878333364554 bayes_pls_golite062009
protein methyltransferase activity 6.08778683840554 bayes_pls_golite062009
lysine N-methyltransferase activity 5.45106430536252 bayes_pls_golite062009
protein-lysine N-methyltransferase activity 5.45106430536252 bayes_pls_golite062009
histone-lysine N-methyltransferase activity 5.45106430536252 bayes_pls_golite062009
N-methyltransferase activity 3.98411678860954 bayes_pls_golite062009
histone methyltransferase activity (H3-K9 specific) 3.54138873512018 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 2.69428385009711 bayes_pls_golite062009
methyltransferase activity 2.33114816345072 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 2.25175257044903 bayes_pls_golite062009
binding 1.67469558504376 bayes_pls_golite062009
transferase activity 1.35661693913815 bayes_pls_golite062009
protein binding 1.07532079834012 bayes_pls_golite062009
nucleic acid binding 0.588883714202448 bayes_pls_golite062009
catalytic activity 0.414641636618101 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle