Protein: | SPCC794.04c |
Organism: | Schizosaccharomyces pombe |
Length: | 547 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC794.04c.
Description | E-value | Query Range |
Subject Range |
|
244.0 | [0..19] | [544..86] |
|
239.0 | [0..10] | [547..44] |
|
235.0 | [0..1] | [544..61] |
|
231.0 | [0..16] | [547..35] |
|
226.0 | [0..5] | [540..27] |
|
224.0 | [0..2] | [546..294] |
|
221.0 | [0..6] | [546..299] |
|
218.0 | [0..10] | [545..592] |
|
217.0 | [0..14] | [491..93] |
Region A: Residues: [1-84] |
1 11 21 31 41 51 | | | | | | 1 MDYIFLITGY KYRHLNLEAY NAKSRAIENE KRYLGNDRNL PFHREREKVE SNPNSSDEED 60 61 LTSTNNTRSS DNTTSDTEDD SGED |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [85-547] |
1 11 21 31 41 51 | | | | | | 1 SYQVEWESGK DPLAPKNWPM WKKIYTLLVA SFIAIVITAN SSIFSDGGGI AAQQYHVGAT 60 61 VGDLCSATFL LGFAAGSVLF APLSEVYGRL PLYSVTLVIF VVFQIGGGCS KNIWSLVIFR 120 121 FFHGFFGCTP MSACGGTISD LFNPIQRTGA LLVFCAAAFV GPLVGPVMGG YITESKLGWR 180 181 WDFWINMIWA GLTWVIVCFT MPETHSETLL DFKARYLRKK TNCDKWYNEH EHQRDPAYAI 240 241 RTALTRGVRL LCTEPIVQAF CMYLVFINIL LYICMVGYPL IFYQYGFNAG EVGLAILGIL 300 301 VGILLGLALT PIIYVHYRRR YEMRDGNICP EDRLFPLFFG SFFIPIALFW LGWTCYPSVH 360 361 WAAPMVSGIF LGWGFLYVLA VCYSYLVDCY HEMAASALSV ATFTRYAAGG GMTIVARPMY 420 421 NNLNYHWATS LLAFVGCGLV PIPFIFFFWG RRIRQRSPHA YKG |
Detection Method: | |
Confidence: | 32.522879 |
Match: | 1pw4A |
Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
organic acid transmembrane transporter activity | 1.24937104052238 | bayes_pls_golite062009 |
secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
binding | 1.01584233411372 | bayes_pls_golite062009 |
alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |