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View Structure Prediction Details

Protein: SPAC589.04
Organism: Schizosaccharomyces pombe
Length: 271 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC589.04.

Description E-value Query
Range
Subject
Range
gi|157748343 - gi|157748343|ref|XP_001669266.1| Hypothetical protein CBG15876 [Caenorhabditis briggsae AF16]
gi|187026866, gi... - gi|39589005|emb|CAE69635.1| Hypothetical protein CBG15876 [Caenorhabditis briggsae], gi|187026866|em...
177.0 [0..1] [258..12]
cdr-6 - glutathione S-transferase status:Confirmed UniProt:Q18830 protein_id:CAA99802.1
177.0 [0..1] [258..12]
gi|17385642 - gi|17385642|dbj|BAB32446.2| glutathione S-transferase [Matricaria chamomilla]
164.0 [0..35] [271..2]

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Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLTKFSSY FHSIFSRFPL ITFSNPYPGE NEDYKTKTVM YLTMWNSDLN SEALDVNSLQ  60
   61 WQTWAKLNDP SIVFLNVSNH ASPDEKVPFI QIESRKLVLN PSLLQYFLKD ESTLQQISPW 120
  121 MSLLINQVET AILLTMYLDN ENFSEIQKKW LPNMSWPLNI IKSIGLPSQI KRKICLQLNE 180
  181 STLDFDAILE DASKAFSALS ELLGSDKWFF NNESPSFLDV SLFAHAEIIN HLPLKNDQLK 240
  241 VVLGTHKNLT DLTTRVRTLA GYTSAGPIAL R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1aw9A
Description: STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 1.27462890839069 bayes_pls_golite062009
transmembrane transporter activity 1.07599729927609 bayes_pls_golite062009
substrate-specific transporter activity 0.861215137904704 bayes_pls_golite062009
binding 0.680816432660797 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.653050863298388 bayes_pls_golite062009
ion transmembrane transporter activity 0.426429995703766 bayes_pls_golite062009
protein binding 0.341730456502484 bayes_pls_golite062009
catalytic activity 0.129588295266429 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle