| Protein: | set3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 859 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for set3.
| Description | E-value | Query Range |
Subject Range |
|
|
439.0 | [0..8] | [859..83] |
|
|
416.0 | [0..8] | [859..1354] |
|
|
413.0 | [0..8] | [859..1442] |
|
|
411.0 | [0..8] | [859..1708] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MWKIRCVCPF EDDDGFTIQC ESCEVWQHAV CVNIDANNVP EKYFCEQCQP RPIDADKAHK 60
61 IQLARLQREE EQSRILS
|
| Detection Method: |  |
| Confidence: | 14.522879 |
| Match: | 1wemA |
| Description: | Solution structure of PHD domain in death inducer-obliterator 1(DIO-1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.57883938223258 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.49333137949283 | bayes_pls_golite062009 |
| methylated histone residue binding | 4.19057851212315 | bayes_pls_golite062009 |
| deacetylase activity | 3.63389424240028 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 3.20023500652896 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 3.20023500652896 | bayes_pls_golite062009 |
| histone binding | 3.01402804224903 | bayes_pls_golite062009 |
| binding | 2.78627791259335 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.32449645578286 | bayes_pls_golite062009 |
| histone methyltransferase activity | 2.02130427551376 | bayes_pls_golite062009 |
| nucleosome binding | 1.69494047037058 | bayes_pls_golite062009 |
| protein binding | 1.6308789519356 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.49667541832007 | bayes_pls_golite062009 |
| 1.38236406424542 | bayes_pls_golite062009 | |
| lysine N-methyltransferase activity | 1.3339105639569 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.3339105639569 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.3339105639569 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K4 specific) | 1.2339461840955 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 1.19037129579681 | bayes_pls_golite062009 |
| chromatin binding | 1.0360039180364 | bayes_pls_golite062009 |
| nucleic acid binding | 1.01735624308761 | bayes_pls_golite062009 |
| DNA binding | 0.896491359501813 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.873079221910902 | bayes_pls_golite062009 |
| transcription regulator activity | 0.723245820583374 | bayes_pls_golite062009 |
| protein kinase activity | 0.405766438875014 | bayes_pls_golite062009 |
| acetyltransferase activity | 0.39905022319963 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.327424740985033 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.14235705491362 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.137650352572163 | bayes_pls_golite062009 |
| 0.0927457062201698 | bayes_pls_golite062009 | |
| phosphotransferase activity, alcohol group as acceptor | 0.0901653273812402 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.0710710324092494 | bayes_pls_golite062009 |
| histone acetyl-lysine binding | 0.0410393640547611 | bayes_pls_golite062009 |
| kinase activity | 0.00387875923819597 | bayes_pls_golite062009 |
|
Region A: Residues: [78-356] |
1 11 21 31 41 51
| | | | | |
1 RSRSSNNKRR TSFGKNGASP THSASPRQGN NTGANGALFS QSTNSSNSGS YRNSVTGATL 60
61 PNAHAPHSQN RRRRSNHLNN PPEAPITEAS NEYVYSFHLE YVPLESNTFS ASALEYSKNL 120
121 DLKNLDESEV LMDGCQVVPI SSSKFCCSRF GLVSTCEIPP NTPIMEVKGR VCTQNEYKSD 180
181 PKNQYNILGA PKPHVFFDSN SQLVVDSRVA GSKARFARKG CQSNSVVSSV YMNGSNSVPR 240
241 FILYSTTHIA PETEIIGDWT LDISHPFRQF APGMSRPSF
|
| Detection Method: | |
| Confidence: | 57.045757 |
| Match: | 2igqA |
| Description: | No description for 2igqA was found. |
|
Region A: Residues: [357-531] |
1 11 21 31 41 51
| | | | | |
1 NMEELELLSE VLSTFLSFNE CASQDKKNCV FSRVTKYIKA ARRASTANRV SVAKDRLSLT 60
61 PSSTPSTPSP AESLPQPSNP TSVYAKSLKE FWLDKYRLSI LQKWPAVKSL PTESVGIDVV 120
121 MEPKLQPSVK EKKPTKDLQS PLPSVEEDSS NRDKKTDIAD LHTDSKVGIA DVLSP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [532-717] |
1 11 21 31 41 51
| | | | | |
1 ISPDAALQSD GPLKKAKEPE ESSITPTTPP SFNVGESLSR RSASPLQHPR TSPDMLDKTS 60
61 PCKRGLGTIT TVHKKHGSVD HLPSVKRRRS IANDFHGKPD YNKRSLSIER KPEAFKTKGD 120
121 RPHKVHPSFH RNSDSKLKLE PSSKEKSGSM FFNTLRTVKD KSHVHDTQRS SDVNFSRQNG 180
181 TRSHSP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [718-859] |
1 11 21 31 41 51
| | | | | |
1 SVSPVGFSFD KSPVTTPPLP TAPAPVITSR HALVNNQFPT NNPNILDHKA NNGDDISNAL 60
61 NTSRSENKPN SNLVQGSVVK PSNTSASALP TSAPKKLSLS EYRQRRQQNI LHQQSKDNQA 120
121 HGDTARPHTV PAATVSNPSF TR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
