| Protein: | etp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 631 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for etp1.
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..3] | [472..6] |
|
|
408.0 | [0..20] | [447..23] |
|
|
407.0 | [0..2] | [465..14] |
|
|
397.0 | [0..1] | [470..18] |
|
|
392.0 | [0..51] | [464..70] |
|
|
392.0 | [0..24] | [473..13] |
|
|
390.0 | [0..2] | [491..17] |
|
|
390.0 | [0..2] | [483..17] |
|
|
388.0 | [0..29] | [466..4] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MNISRSSGLM RQFLLQPLRK GCDISCLGRS SWRMSRSFSG SSVLNEINLS RTKNLFLNDC 60
61 KFNKNSFEKF FARRLSNSVA PTPGGILQET EKI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.538 | a.39.1 | EF-hand |
| View | Download | 0.518 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.649 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.566 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.588 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
|
Region A: Residues: [94-260] |
1 11 21 31 41 51
| | | | | |
1 PSKKVAFWLL GSSALVLAIV VVGGITRLTE SGLSITEWKP ITGVIPPLTD EQWNQEFELY 60
61 KKSPEFEKLN SHMTVDEFKN IFFWEWFHRV LGRGIGLTIL LPSIYMIVTK RASPWLSKRL 120
121 IGLTGLVGLQ GVIGWWMVKS GLSEELFSDG SHPRVSHYRL ATHLAAA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [261-477] |
1 11 21 31 41 51
| | | | | |
1 VALYIGLVWT GHGILQRHAF LKSMKSGSTS QLTSMVSSVQ KMKGFRTSVN SFVGLVLITL 60
61 LSGAFVAGLD AGMIYCTFPE MGEGRLAPSK SELFDQRFCR KDDKSDLIWR NMIDNPSLVQ 120
121 LEHRILAITT FVAACGLFIF SRAKRNILPK KIKTSINVVT GVVTAQATLG IMTLIYVVPV 180
181 PLAALHQAGS LVTLTAALSL AQRLHPEYAL KNIRSWT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [478-631] |
1 11 21 31 41 51
| | | | | |
1 KLISSPPKSS ISSSILTQQR QFHTFRPSFH SEIKKPLPGT GIKVFFVTPE GREIMIEGNE 60
61 GDSILDLAHA NNIDLEGACE GSVACSTCHV IVDPEHYELL DPPEEDEEDM LDLAFGLEET 120
121 SRLGCQVLLR KDLDGIRVRI PAQTRNIRLE RPKA
|
| Detection Method: | |
| Confidence: | 27.30103 |
| Match: | 1i7hA |
| Description: | Adrenodoxin-like ferredoxin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| electron carrier activity | 5.46307392364196 | bayes_pls_golite062009 |
| oxidoreductase activity | 5.29161103487613 | bayes_pls_golite062009 |
| NADH dehydrogenase activity | 4.24327638063454 | bayes_pls_golite062009 |
| NADH dehydrogenase (quinone) activity | 4.15859537745252 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 3.78210410787032 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 3.67682177056786 | bayes_pls_golite062009 |
| succinate dehydrogenase activity | 3.27019699125535 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-CH group of donors | 2.73204059194206 | bayes_pls_golite062009 |
| binding | 1.24006712894981 | bayes_pls_golite062009 |
| iron-sulfur cluster binding | 0.37907856540545 | bayes_pls_golite062009 |
| metal cluster binding | 0.37907856540545 | bayes_pls_golite062009 |
| protein binding | 0.200129038442128 | bayes_pls_golite062009 |
| catalytic activity | 0.105119876745552 | bayes_pls_golite062009 |
