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View Structure Prediction Details

Protein: CG33713-PB, CG33...
Organism: Drosophila melanogaster
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33713-PB, CG33....

Description E-value Query
Range
Subject
Range
gi|115628164, gi... - gi|115941075|ref|XP_001187293.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
308.0 [0..1] [242..230]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSDTDTVD ELFHLATEHV AKQSNSIGSA DLLIFYGYYK QATNGPCKEQ SPGLLQLQAK  60
   61 SKWQAWRNLG TMSQSAARQA YVQKLQELQP NWRSRRNPGW VVHSIESVPL EDQRLDSEKT 120
  121 LFDHVKENNL DRLRELLQPS DLVKLDEHGM ALIHWATDRN AVEIIQFLVR SGASVNQRDA 180
  181 EQQTPLHYAA SCGHLEALQC LLELHASLEL RDSDGQTCYD VADDEQICQV LQTERERLAG 240
  241 SAS

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Detection Method: PSI-BLAST
Confidence: 58.39794
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.7296155364795 bayes_pls_golite062009
protein binding 1.32974028205196 bayes_pls_golite062009
transporter activity 0.45725966457108 bayes_pls_golite062009
transmembrane transporter activity 0.269535783922896 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle