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View Structure Prediction Details

Protein: CG4607-PB, CG4607-PA
Organism: Drosophila melanogaster
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4607-PB, CG4607-PA.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
327.0 [0..2] [525..75]

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Predicted Domain #1
Region A:
Residues: [1-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGQQEEQLV PPPAYKPTVV AKDTTKDSHA KEKPLGEGRL AVLRQELMVF LGNSGVLGSG  60
   61 MVVSMPAVTL NQLHDETQPF WLNKDESSWF ASIQNMACPL GGLLVSYFLD RIGRKHTILL 120
  121 TNLIGLIGWI LLVTSFMHSD RDMIYYQMLL GRCFGGIMIG MFVSPVGVYS AEISLPKIRG 180
  181 RLILGTSLGL ASGILLMYCL GYFIRHNIQL IFGISCCYQL AATLLVFPMP ESPSWLLTRG 240
  241 KEERARKSLR YFRGLPKKEV DYVPEFEAEL AHMKELADAS NTTAAGESLS QMIHRPEVYK 300
  301 PVLMMTTFFG FQQACGVVVI IVYAVQIAQQ AGVTIDPVLV AVMLGVARII TTLFMSGIFE 360
  361 KWGRKPSGIF SATGMGACML LLAGGNWFPD TLGTLHWLPV ACIVAHIVFS TMGMLTLPFF 420
  421 MISEVFPQRA RGSASGIAIF FGMILAFIML KIYPNMEAAL GTANLFAFYA GISFLAAAFI 480
  481 GVFVPETRGR TLEELEERWQ TGKFSRRLTI VNLKDVELHE VFLKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.045757
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 4.09176719149278 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.54194478414824 bayes_pls_golite062009
sugar:hydrogen symporter activity 2.99050613058546 bayes_pls_golite062009
cation:sugar symporter activity 2.99050613058546 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 2.62141276633776 bayes_pls_golite062009
hexose phosphate transmembrane transporter activity 2.52135563059944 bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity 2.52135563059944 bayes_pls_golite062009
sugar transmembrane transporter activity 2.47557586092261 bayes_pls_golite062009
ion transmembrane transporter activity 2.21266150105753 bayes_pls_golite062009
solute:hydrogen symporter activity 2.10485633822652 bayes_pls_golite062009
cation transmembrane transporter activity 1.79369588808394 bayes_pls_golite062009
monosaccharide transmembrane transporter activity 1.6904339767429 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
binding 1.25550149366993 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009

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