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View Structure Prediction Details

Protein: kdn-PA
Organism: Drosophila melanogaster
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kdn-PA.

Description E-value Query
Range
Subject
Range
CISY2_AEDAE - Probable citrate synthase 2, mitochondrial OS=Aedes aegypti GN=AAEL011789 PE=3 SV=1
527.0 [0..1] [462..1]

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Predicted Domain #1
Region A:
Residues: [1-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLYRISARK LSEAQKLPNV GAYVRMIAAD GKSLRDVLAA KVPQEQERVK NFRKQHGATK  60
   61 MGETTIDMMY GGMRGIKALV TETSVLDADE GIRFRGLSIP ECQKVLPAAD GGTEPLPEGL 120
  121 FWLLLTGEVP TKSQVQQLSR EWAERAALPQ HVVTMLNNMP TTLHPMSQFA AAVTALNHDS 180
  181 KFAKAYSDGV HKSKYWEYVY EDSMDLIAKL PVVAATIYCN TYRGGKGSRS IDSSLDWSAN 240
  241 FVKMLGYDNA PFTELMRLYL TIHSDHEGGN VSAHTVHLVG SALSDPYLSF AAGLNGLAGP 300
  301 LHGLANQEVL VWLRKLQKEA GNNPSEEQLK EYIWKTLKSG QVVPGYGHAV LRKTDPRYTC 360
  361 QREFALKHLP EDETFQLVSK IYKVVPPILT ETGKVKNPWP NVDAHSGVLL QYYGMKEMNY 420
  421 YTVLFGVSRA LGVLASLVWD RALGLPIERP KSFSTDLLVK MVQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1ctsA
Description: CRYSTALLOGRAPHIC REFINEMENT AND ATOMIC MODELS OF TWO DIFFERENT FORMS OF CITRATE SYNTHASE AT 2.7 AND 1.7 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
citrate (Si)-synthase activity 7.90380661459876 bayes_pls_golite062009
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 7.35970609422108 bayes_pls_golite062009
transferase activity, transferring acyl groups 4.98392594633005 bayes_pls_golite062009
catalytic activity 2.51855037019879 bayes_pls_golite062009
transferase activity 2.22659761972612 bayes_pls_golite062009
binding 1.15467737113069 bayes_pls_golite062009
protein binding 0.210158634792359 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle