YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG9393-PA
Organism: Drosophila melanogaster
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9393-PA.

Description E-value Query
Range
Subject
Range
gi|74225105, gi|... - gi|74225105|dbj|BAE38248.1| unnamed protein product [Mus musculus], gi|74208622|dbj|BAE37568.1| unna...
232.0 [0..3] [321..1]

Back

Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMQLGAMLY VYKGEYGLPS IDFECLRALC LLRFTRCPMD VQTSSNPLRS GAGKLPYLQI  60
   61 GNQKFAGYRQ IKRVLDLEGY PIDAHLSTKQ KHLSTAYANW VFTNLHAYYH YFLFGEPHNF 120
  121 DTTTRGLYAK RTPFPFNFYY PSSYQREACD VVQVMAGFDV NDKLDKHEGD YLVVNAKKVV 180
  181 NLLSRKLGRK VWFFGDTYSE FDAIVYSYLA IIFKIALPNN PLQNHIKGCQ NLVNFINRIT 240
  241 KDIFRIEGYS SVKLTKTPSG TEASLTASER KFLDSELNTK IVAGVGAVLA MGAFAAWRGI 300
  301 YNQLTTRSST DYDGIDYEDD EMEEGLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 1aw9A
Description: STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 1.27462890839069 bayes_pls_golite062009
transmembrane transporter activity 1.07599729927609 bayes_pls_golite062009
binding 0.680816432660797 bayes_pls_golite062009
substrate-specific transporter activity 0.606399690109114 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.408004169194059 bayes_pls_golite062009
protein binding 0.341730456502484 bayes_pls_golite062009
ion transmembrane transporter activity 0.154126934127606 bayes_pls_golite062009
catalytic activity 0.129588295266429 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle