YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: pgant3-PA
Organism: Drosophila melanogaster
Length: 667 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pgant3-PA.

Description E-value Query
Range
Subject
Range
gi|125806852, gi... - gi|54635358|gb|EAL24761.1| GA18187 [Drosophila pseudoobscura pseudoobscura], gi|125806852|ref|XP_001...
gi|125806852|ref... - GA18187-PA [Drosophila pseudoobscura], GA18187 [Drosophila pseudoobscura pseudoobscura]
449.0 [0..1] [667..1]

Back

Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRFQQLKK LWLLYLFLLF FAFFMFAISI NLYVASIQGG DAEMRHPKPP PKRRSLWPHK  60
   61 NIVAHYIGKG DIFGNMTADD YNINLFQPIN GEGADGRPVV VPPRDRFRMQ RFFRLNSFNL 120
  121 LASDRIPLNR TL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDYRTPECRD KKYASGLPST SVIIVFHNEA WSVLLRTITS VINRSPRHLL KEIILVDDAS  60
   61 DRSYLKRQLE SYVKVLAVPT RIFRMKKRSG LVPARLLGAE NARGDVLTFL DAHCECSRGW 120
  121 LEPLLSRIKE SRKVVICPVI DIISDDNFSY TKTFENHWGA FNWQLSFRWF SSDRKRQTAG 180
  181 NSSKDSTDPI ATPGMAGGLF AIDRKYFYEM GSYDSNMRVW GGENVEMSFR IWQCGGRVEI 240
  241 SPCSHVGHVF RSSTPYTFPG GMSEVLTDNL ARAATVWMDD WQYFIMLYTS GLTLGAKDKV 300
  301 NVTERVALRE RLQCKPFSWY LENIWPEHFF PAPDRFFGKI IWLDGETECA QAYSKHMKNL 360
  361 PGRALSREWK RAFEEIDSKA EELMALIDLE RDKCLRPLKE DVPRSSLSAV TVGDCTSHAQ 420
  421 SMDMFVITPK GQIMTNDNVC LTYRQQKLGV IKMLKNRNAT TSNVMLAQCA SDSSQLWTYD 480
  481 MDTQQISHRD TKLCLTLKAA TNSRLQKVEK VVLSMECDFK DITQKWGFIP LPWRM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.522879
Match: 1xhbA
Description: The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
polypeptide N-acetylgalactosaminyltransferase activity 8.87768693404638 bayes_pls_golite062009
UDP-glycosyltransferase activity 6.50620584399191 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 6.18010634203776 bayes_pls_golite062009
mannosyltransferase activity 5.57855076532185 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 4.57071306027628 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 4.49413422196176 bayes_pls_golite062009
alpha-1,2-mannosyltransferase activity 3.80392076707564 bayes_pls_golite062009
N-acetyllactosamine synthase activity 3.59789520866149 bayes_pls_golite062009
lactose synthase activity 3.59789520866149 bayes_pls_golite062009
transferase activity 2.62166586999833 bayes_pls_golite062009
UDP-galactosyltransferase activity 2.58196286090865 bayes_pls_golite062009
galactosyltransferase activity 2.49617255507474 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.01768771829228 bayes_pls_golite062009
nucleotidyltransferase activity 1.92166853180381 bayes_pls_golite062009
catalytic activity 1.88676710996045 bayes_pls_golite062009
beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity 1.19868452856458 bayes_pls_golite062009
glucuronosyltransferase activity 0.95636156520578 bayes_pls_golite062009
alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity 0.67130966261979 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.412018910498896 bayes_pls_golite062009
uridylyltransferase activity 0.321928989676507 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.2363835251362 bayes_pls_golite062009
cytidylyltransferase activity 0.218759888732981 bayes_pls_golite062009
binding 0.074398891333042 bayes_pls_golite062009
guanylyltransferase activity 0.0539392112504681 bayes_pls_golite062009
acetylglucosaminyltransferase activity 0.0278258721775009 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle