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View Structure Prediction Details

Protein: FABPI_RAT
Organism: Rattus norvegicus
Length: 132 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FABPI_RAT.

Description E-value Query
Range		 Subject
Range
gi|114658435 - gi|114658435|ref|XP_001142851.1| PREDICTED: similar to cellular retinoic acid-binding protein; CRABP...
 177.0 [0..3] [132..248]
FABPH_RAT - Fatty acid-binding protein, heart OS=Rattus norvegicus GN=Fabp3 PE=1 SV=2
 165.0 [0..2] [132..4]
gi|226536920, gi... - gi|39939390|gb|AAR32738.1| fatty acid-binding protein [Capra hircus], gi|226536920|gb|ACO72586.1| he...
 164.0 [0..2] [132..4]
FABPH_PIG - Fatty acid-binding protein, heart OS=Sus scrofa GN=FABP3 PE=2 SV=3
 164.0 [0..2] [132..4]
FABP7_CHICK - Fatty acid-binding protein, brain OS=Gallus gallus GN=FABP7 PE=2 SV=2
 163.0 [0..2] [131..4]
FABPH_ICTTR - Fatty acid-binding protein, heart OS=Ictidomys tridecemlineatus GN=FABP3 PE=2 SV=3
 163.0 [0..2] [132..4]
gi|57043188 - gi|57043188|ref|XP_535331.1| PREDICTED: similar to Fatty acid-binding protein, heart (H-FABP) (Heart...
 163.0 [0..2] [132..4]
CCDS5127.1_1 - null
gi|109072829, gi... - gi|109072829|ref|XP_001108559.1| PREDICTED: fatty acid binding protein 7, brain isoform 2 [Macaca mu...
gi|90082527 - gi|90082527|dbj|BAE90445.1| unnamed protein product [Macaca fascicularis]
 163.0 [0..2] [131..4]
FABP7_BOVIN - Fatty acid-binding protein, brain OS=Bos taurus GN=FABP7 PE=1 SV=2
 163.0 [0..2] [131..4]

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Predicted Domain #1
Region A:
Residues: [1-132] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFDGTWKVD RNENYEKFME KMGINVVKRK LGAHDNLKLT ITQEGNKFTV KESSNFRNID  60
   61 VVFELGVDFA YSLADGTELT GTWTMEGNKL VGKFKRVDNG KELIAVREIS GNELIQTYTY 120
  121 EGVEAKRIFK KE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.522879
Match: 1ifcA
Description: REFINEMENT OF THE STRUCTURE OF RECOMBINANT RAT INTESTINAL FATTY ACID-BINDING APOPROTEIN AT 1.2 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
long-chain fatty acid transporter activity 5.31242454679135 bayes_pls_golite062009
fatty acid transporter activity 5.05947161650978 bayes_pls_golite062009
lipid transporter activity 4.30505384117861 bayes_pls_golite062009
retinoid binding 3.86745158299736 bayes_pls_golite062009
isoprenoid binding 3.80802424204178 bayes_pls_golite062009
lysophospholipid transporter activity 3.53484598441971 bayes_pls_golite062009
retinol binding 3.41359399354212 bayes_pls_golite062009
binding 2.93830472620404 bayes_pls_golite062009
transcription regulator activity 2.27413749831465 bayes_pls_golite062009
transporter activity 2.15627660314839 bayes_pls_golite062009
transcription repressor activity 1.45696778890481 bayes_pls_golite062009
protein binding 1.23450129884619 bayes_pls_golite062009
prostaglandin-D synthase activity 1.18764036773412 bayes_pls_golite062009
lipid binding 1.0002255159651 bayes_pls_golite062009
retinol transporter activity 0.811095267558536 bayes_pls_golite062009
fatty acid binding 0.761923641769607 bayes_pls_golite062009
substrate-specific transporter activity 0.670647472301401 bayes_pls_golite062009
retinoic acid binding 0.539496110498594 bayes_pls_golite062009
bile acid binding 0.37501307074598 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle