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View Structure Prediction Details

Protein: KCIP4_RAT
Organism: Rattus norvegicus
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCIP4_RAT.

Description E-value Query
Range
Subject
Range
gi|125545976 - gi|125545976|gb|EAY92115.1| hypothetical protein OsI_13822 [Oryza sativa Indica Group]
gi|115455805, gi... - gi|50355719|gb|AAT75244.1| putative calcium-dependent protein kinase [Oryza sativa (japonica cultiva...
177.0 [0..1] [235..350]
gi|3320104, gi|1... - pir||T02784 calcium-dependent protein kinase (EC 2.7.1.-) - maize (strain W64A), gi|3320104|emb|CAA...
175.0 [0..5] [235..373]
gi|29892287 - gi|29892287|gb|AAP03014.1| seed calcium dependent protein kinase c [Glycine max]
172.0 [0..5] [236..303]
gi|13561063 - gi|13561063|emb|CAA65500.1| protein kinase [Medicago sativa]
171.0 [0..5] [236..308]
gi|90820099 - gi|90820099|gb|ABD98804.1| calcium-dependent protein kinase [Triticum aestivum]
171.0 [0..1] [234..302]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVRRVESIS AQLEEASSTG GFLYAQNNTK RSIKERLMKL LPCSAAKTSS PAIQNSVEDE  60
   61 LEMATVRHRP EALELLEAQS KFTKKELQIL YRGFKNECPS GVVNEETFKE IYSQFFPQGD 120
  121 STTYAHFLFN AFDTDHNGAV SFEDFIKGLS ILLRGTVQEK LNWAFNLYDI NKDGYITKEE 180
  181 MLDIMKAIYD MMGKCTYPVL KEDAPRQHVE TFFQKMDKNK DGVVTIDEFI ESCQKDENIM 240
  241 RSMQLFENVI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.09691
Match: 1s1eA
Description: Crystal Structure of Kv Channel-interacting protein 1 (KChIP-1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.47426847861728 bayes_pls_golite062009
potassium channel activity 7.31572604600658 bayes_pls_golite062009
voltage-gated potassium channel activity 7.1656041137236 bayes_pls_golite062009
metal ion transmembrane transporter activity 6.53737551705203 bayes_pls_golite062009
voltage-gated cation channel activity 6.46274559290395 bayes_pls_golite062009
protein serine/threonine phosphatase activity 6.37104157544514 bayes_pls_golite062009
voltage-gated ion channel activity 6.32858724857607 bayes_pls_golite062009
voltage-gated channel activity 6.31470023658818 bayes_pls_golite062009
phosphatase activity 6.28157965296365 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.17799259119197 bayes_pls_golite062009
cation channel activity 5.62013996724225 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity 5.58369939851095 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.11186887221409 bayes_pls_golite062009
ion channel activity 5.06338247555276 bayes_pls_golite062009
passive transmembrane transporter activity 4.99731772671077 bayes_pls_golite062009
channel activity 4.99731772671077 bayes_pls_golite062009
ER retention sequence binding 4.95600586897782 bayes_pls_golite062009
substrate-specific channel activity 4.94682197815593 bayes_pls_golite062009
gated channel activity 4.82486815476433 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase regulator activity 4.70715233640875 bayes_pls_golite062009
calcium ion binding 3.79609619542776 bayes_pls_golite062009
outward rectifier potassium channel activity 3.46300007342871 bayes_pls_golite062009
binding 3.17556402087346 bayes_pls_golite062009
metal ion binding 2.62077305565026 bayes_pls_golite062009
cation binding 2.62077305565026 bayes_pls_golite062009
ion binding 2.61312132078717 bayes_pls_golite062009
ion transmembrane transporter activity 2.57032504567157 bayes_pls_golite062009
cation transmembrane transporter activity 2.55650624542181 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.37465721152046 bayes_pls_golite062009
clathrin binding 2.36616108128297 bayes_pls_golite062009
protein binding 2.21291432166051 bayes_pls_golite062009
structural constituent of muscle 2.10508506037972 bayes_pls_golite062009
A-type (transient outward) potassium channel activity 2.0364202572487 bayes_pls_golite062009
transcription regulator activity 1.9739523190593 bayes_pls_golite062009
cytoskeletal protein binding 1.6550001867465 bayes_pls_golite062009
signal transducer activity 1.56751504958972 bayes_pls_golite062009
molecular transducer activity 1.56751504958972 bayes_pls_golite062009
DNA binding 1.55722307354604 bayes_pls_golite062009
nucleic acid binding 1.53225451586959 bayes_pls_golite062009
calcium-dependent protein kinase inhibitor activity 1.29632226581856 bayes_pls_golite062009
actin filament binding 1.25849450788569 bayes_pls_golite062009
actin binding 1.1967948958876 bayes_pls_golite062009
transporter activity 1.15928534291452 bayes_pls_golite062009
calcium sensitive guanylate cyclase activator activity 0.98432853950796 bayes_pls_golite062009
transmembrane transporter activity 0.945691505472547 bayes_pls_golite062009
phosphatase regulator activity 0.87149881541475 bayes_pls_golite062009
motor activity 0.85125321350375 bayes_pls_golite062009
guanylate cyclase regulator activity 0.84389905735679 bayes_pls_golite062009
cyclase regulator activity 0.84389905735679 bayes_pls_golite062009
protein phosphatase regulator activity 0.822713961141111 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.787740261079819 bayes_pls_golite062009
kinase activity 0.782396352346639 bayes_pls_golite062009
calcium channel regulator activity 0.7164851905066 bayes_pls_golite062009
substrate-specific transporter activity 0.693724160233023 bayes_pls_golite062009
transcription repressor activity 0.666488715029225 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.654002071540024 bayes_pls_golite062009
microfilament motor activity 0.515693296786409 bayes_pls_golite062009
0.34446792626966 bayes_pls_golite062009
channel regulator activity 0.32809521759917 bayes_pls_golite062009
active transmembrane transporter activity 0.246383459363256 bayes_pls_golite062009
potassium channel regulator activity 0.24182293264521 bayes_pls_golite062009
N-terminal myristoylation domain binding 0.234166588492671 bayes_pls_golite062009
structural molecule activity 0.048100972187449 bayes_pls_golite062009

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