| Protein: | FSHB_RAT |
| Organism: | Rattus norvegicus |
| Length: | 130 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FSHB_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
189.0 | [0..1] | [130..1] |
|
|
188.0 | [0..1] | [130..1] |
|
|
188.0 | [0..2] | [130..1] |
|
|
188.0 | [0..2] | [130..1] |
|
|
185.0 | [0..11] | [126..356] |
|
|
185.0 | [0..2] | [130..1] |
|
|
184.0 | [0..2] | [130..1] |
|
|
184.0 | [0..2] | [130..1] |
|
|
183.0 | [0..2] | [130..1] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MMKSIQLCIL LWCLRAVCCH SCELTNITIS VEKEECRFCI SINTTWCEGY CYTRDLVYKD 60
61 PARPNTQKVC TFKELVYETI RLPGCARHSD SLYTYPVATE CHCGKCDSDS TDCTVRGLGP 120
121 SYCSFGEMKE
|
| Detection Method: |  |
| Confidence: | 40.69897 |
| Match: | 1xwdB |
| Description: | Crystal Structure of Human Follicle Stimulating Hormone Complexed with its Receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 4.98600168355158 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 4.8369569327215 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 4.69128752159226 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 4.69128752159226 | bayes_pls_golite062009 |
| growth factor activity | 4.01406832911234 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 3.35517597922994 | bayes_pls_golite062009 |
| cytokine activity | 2.90799896011039 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 2.76400237542695 | bayes_pls_golite062009 |
| type II transforming growth factor beta receptor binding | 2.7562170740679 | bayes_pls_golite062009 |
| binding | 2.64101807129423 | bayes_pls_golite062009 |
| growth factor binding | 2.41942870726502 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 2.36823915226245 | bayes_pls_golite062009 |
| protein binding | 2.36794464190805 | bayes_pls_golite062009 |
| cell surface binding | 2.33284053060339 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.9734035688309 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 1.78479767888975 | bayes_pls_golite062009 |
| heparin binding | 1.73353807509439 | bayes_pls_golite062009 |
| pattern binding | 1.34327634476459 | bayes_pls_golite062009 |
| polysaccharide binding | 1.17302952845956 | bayes_pls_golite062009 |
| platelet-derived growth factor binding | 1.16893591942376 | bayes_pls_golite062009 |
| hormone activity | 0.94314407550729 | bayes_pls_golite062009 |
| SMAD binding | 0.918765103972039 | bayes_pls_golite062009 |
| collagen binding | 0.894753581887191 | bayes_pls_golite062009 |
| protein dimerization activity | 0.697058311884552 | bayes_pls_golite062009 |
| follicle-stimulating hormone activity | 0.648906125812902 | bayes_pls_golite062009 |
| carbohydrate binding | 0.37618196282327 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.344090347736442 | bayes_pls_golite062009 |
| identical protein binding | 0.273591586673912 | bayes_pls_golite062009 |
| fibronectin binding | 0.1110090445978 | bayes_pls_golite062009 |
| catalytic activity | 0.105223830172599 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 3 binding | 0.0796166411998893 | bayes_pls_golite062009 |
