Protein: | CCS_MOUSE |
Organism: | Mus musculus |
Length: | 274 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCS_MOUSE.
Description | E-value | Query Range |
Subject Range |
|
290.0 | [0..1] | [274..1] |
|
290.0 | [0..1] | [274..1] |
|
286.0 | [0..1] | [274..1] |
|
284.0 | [0..1] | [274..1] |
|
281.0 | [0..1] | [274..1] |
|
268.0 | [0..20] | [274..1] |
|
250.0 | [0..12] | [269..7] |
|
246.0 | [0..4] | [274..3] |
Region A: Residues: [1-91] |
1 11 21 31 41 51 | | | | | | 1 MASKSGDGGT VCALEFAVQM SCQSCVDAVH KTLKGVAGVQ NVDVQLENQM VLVQTTLPSQ 60 61 EVQALLESTG RQAVLKGMGS SQLQNLGAAV A |
Detection Method: | |
Confidence: | 9.522879 |
Match: | 2crlA |
Description: | The apo form of HMA domain of copper chaperone for superoxide dismutase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [92-274] |
1 11 21 31 41 51 | | | | | | 1 ILEGCGSIQG VVRFLQLSSE LCLIEGTIDG LEPGLHGLHV HQYGDLTRDC NSCGDHFNPD 60 61 GASHGGPQDT DRHRGDLGNV RAEAGGRATF RIEDKQLKVW DVIGRSLVID EGEDDLGRGG 120 121 HPLSKITGNS GKRLACGIIA RSAGLFQNPK QICSCDGLTI WEERGRPIAG QGRKDSAQPP 180 181 AHL |
Detection Method: | |
Confidence: | 40.69897 |
Match: | 1do5A |
Description: | Copper chaperone for superoxide dismutase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
protein phosphatase 2B binding | 13.5719110466797 | bayes_pls_golite062009 |
superoxide dismutase activity | 12.1093323949609 | bayes_pls_golite062009 |
oxidoreductase activity, acting on superoxide radicals as acceptor | 12.1093323949609 | bayes_pls_golite062009 |
superoxide dismutase copper chaperone activity | 5.30724557593005 | bayes_pls_golite062009 |
chaperone binding | 5.11696266714142 | bayes_pls_golite062009 |
copper ion binding | 4.51765925795625 | bayes_pls_golite062009 |
copper chaperone activity | 3.53752588768671 | bayes_pls_golite062009 |
protein phosphatase binding | 3.26481550276071 | bayes_pls_golite062009 |
phosphatase binding | 3.1414149853516 | bayes_pls_golite062009 |
metallochaperone activity | 2.82622922333955 | bayes_pls_golite062009 |
copper ion transmembrane transporter activity | 2.53311528765098 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 2.46331862428318 | bayes_pls_golite062009 |
transition metal ion binding | 2.451533032488 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 2.41954384727602 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 2.30916666149383 | bayes_pls_golite062009 |
binding | 2.28211284921339 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 2.0278666635337 | bayes_pls_golite062009 |
protein binding | 1.96660745768497 | bayes_pls_golite062009 |
enzyme binding | 1.82618630359051 | bayes_pls_golite062009 |
metal ion binding | 1.79413011653575 | bayes_pls_golite062009 |
cation binding | 1.79413011653575 | bayes_pls_golite062009 |
ion binding | 1.78699219376941 | bayes_pls_golite062009 |
transition metal ion transmembrane transporter activity | 1.64083855886256 | bayes_pls_golite062009 |
inorganic cation transmembrane transporter activity | 1.63756992236587 | bayes_pls_golite062009 |
transporter activity | 1.33910763967058 | bayes_pls_golite062009 |
transmembrane transporter activity | 1.12504351752996 | bayes_pls_golite062009 |
catalytic activity | 1.09233965765942 | bayes_pls_golite062009 |
di-, tri-valent inorganic cation transmembrane transporter activity | 0.704985452118462 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.618042428454534 | bayes_pls_golite062009 |
zinc ion binding | 0.25600715352161 | bayes_pls_golite062009 |
antioxidant activity | 0.240491838042064 | bayes_pls_golite062009 |