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View Structure Prediction Details

Protein: gi|90586078, gi|...
Organism: Staphylococcus aureus subsp. aureus JH9
Length: 88 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90586078, gi|....

Description E-value Query
Range
Subject
Range
PTHP_STACA - Phosphocarrier protein HPr OS=Staphylococcus carnosus GN=ptsH PE=1 SV=2
gi|224476194, gi... - gi|224476194|ref|YP_002633800.1| phosphocarrier protein HPR [Staphylococcus carnosus subsp. carnosus...
115.0 [0..1] [88..1]
gi|68447600, gi|... - gi|70726876|ref|YP_253790.1| phosphocarrier protein HPr [Staphylococcus haemolyticus JCSC1435], gi|6...
115.0 [0..1] [88..1]
gi|57637238, gi|... - gi|57866580|ref|YP_188254.1| phosphocarrier protein HPr [Staphylococcus epidermidis RP62A], gi|57637...
gi|27315243, gi|... - gi|27467699|ref|NP_764336.1| phosphocarrier protein HPr [Staphylococcus epidermidis ATCC 12228], gi|...
gi|242242388, gi... - gi|242242388|ref|ZP_04796833.1| PTS family porter component HPr [Staphylococcus epidermidis W23144],...
gi|251805947, gi... - gi|251810536|ref|ZP_04825009.1| PTS family porter component HPr [Staphylococcus epidermidis BCM-HMP0...
114.0 [0..1] [88..1]
gi|72495532, gi|... - gi|73663017|ref|YP_301798.1| phosphocarrier protein HPr [Staphylococcus saprophyticus subsp. saproph...
113.0 [0..1] [86..1]
PTHP_STAXY - Phosphocarrier protein HPr OS=Staphylococcus xylosus GN=ptsH PE=1 SV=1
113.0 [0..1] [86..1]
gi|20808237, gi|... - gi|20808237|ref|NP_623408.1| phosphotransferase system, HPr-related proteins [Thermoanaerobacter ten...
gi|20808237 - gi|20808237|ref|NP_623408.1| Phosphotransferase system, HPr-related proteins [Thermoanaerobacter ten...
112.0 [0..1] [88..1]
PTHP_BACME - Phosphocarrier protein HPr OS=Bacillus megaterium GN=ptsH PE=1 SV=1
112.0 [0..1] [88..1]
gi|74057926, gi|... - gi|74318431|ref|YP_316171.1| HPrNtr [Thiobacillus denitrificans ATCC 25259], gi|74057926|gb|AAZ98366...
112.0 [0..1] [88..1]
PTHP_BACSU - Phosphocarrier protein HPr OS=Bacillus subtilis (strain 168) GN=ptsH PE=1 SV=3
PTHP_BACSU - Phosphocarrier protein HPr OS=Bacillus subtilis GN=ptsH PE=1 SV=3
gi|221313587 - gi|221313587|ref|ZP_03595392.1| phosphocarrier protein HPr [Bacillus subtilis subsp. subtilis str. N...
gi|154685800, gi... - gi|154685800|ref|YP_001420961.1| phosphocarrier protein HPr [Bacillus amyloliquefaciens FZB42], gi|1...
gi|221322783 - gi|221322783|ref|ZP_03604077.1| phosphocarrier protein HPr [Bacillus subtilis subsp. subtilis str. S...
gi|221318509 - gi|221318509|ref|ZP_03599803.1| phosphocarrier protein HPr [Bacillus subtilis subsp. subtilis str. J...
111.0 [0..1] [88..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQNSYVIID ETGIHARPAT MLVQTASKFD SDIQLEYNGK KVNLKSIMGV MSLGVGKDAE  60
   61 ITIYADGSDE SDAIQAISDV LSKEGLTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.522879
Match: 1qr5A
Description: Histidine-containing phosphocarrier protein (HPr)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein-N(PI)-phosphohistidine-sugar phosphotransferase activity 5.70778264466435 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 4.7398246519874 bayes_pls_golite062009
transporter activity 1.94557075462337 bayes_pls_golite062009
transmembrane transporter activity 1.8285077384404 bayes_pls_golite062009
active transmembrane transporter activity 1.73790085561506 bayes_pls_golite062009
substrate-specific transporter activity 1.57976971135135 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.4723961195197 bayes_pls_golite062009
catalytic activity 1.16445344378552 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.97685688328333 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.61783246115451 bayes_pls_golite062009
binding 0.569728786489819 bayes_pls_golite062009
transferase activity 0.08533057053308 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle