| Protein: | CLN3 |
| Organism: | Homo sapiens |
| Length: | 438 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLN3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..438] | [1..438] |
|
|
0.0 | [1..437] | [1..437] |
|
|
0.0 | [1..438] | [1..438] |
|
|
0.0 | [1..438] | [1..438] |
|
|
0.0 | [1..437] | [1..437] |
|
|
0.0 | [1..419] | [1..419] |
|
Region A: Residues: [1-438] |
1 11 21 31 41 51
| | | | | |
1 MGGCAGSRRR FSDSEGEETV PEPRLPLLDH QGAHWKNAVG FWLLGLCNNF SYVVMLSAAH 60
61 DILSHKRTSG NQSHVDPGPT PIPHNSSSRF DCNSVSTAAV LLADILPTLV IKLLAPLGLH 120
121 LLPYSPRVLV SGICAAGSFV LVAFSHSVGT SLCGVVFASI SSGLGEVTFL SLTAFYPRAV 180
181 ISWWSSGTGG AGLLGALSYL GLTQAGLSPQ QTLLSMLGIP ALLLASYFLL LTSPEAQDPG 240
241 GEEEAESAAR QPLIRTEAPE SKPGSSSSLS LRERWTVFKG LLWYIVPLVV VYFAEYFINQ 300
301 GLFELLFFWN TSLSHAQQYR WYQMLYQAGV FASRSSLRCC RIRFTWALAL LQCLNLVFLL 360
361 ADVWFGFLPS IYLVFLIILY EGLLGGAAYV NTFHNIALET SDEHREFAMA ATCISDTLGI 420
421 SLSGLLALPL HDFLCQLS
|
| Detection Method: |  |
| Confidence: | 1.83 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 3.82096685159505 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.34396155292818 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.32643461660963 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.2506965512085 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.05049771748124 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.02370427376594 | bayes_pls_golite062009 |
| binding | 1.9065830290222 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.62538016506437 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.46819549608723 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 0.869150152038001 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 0.273403673499648 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 0.273403673499648 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.222664452597504 | bayes_pls_golite062009 |
