Protein: | BLM10 |
Organism: | Saccharomyces cerevisiae |
Length: | 2143 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BLM10.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [197..2134] | [48..1946] |
|
0.0 | [8..2142] | [17..2199] |
|
0.0 | [1..2143] | [1..2143] |
|
0.0 | [5..2143] | [2..2145] |
|
0.0 | [209..2143] | [59..1968] |
|
0.0 | [1103..2143] | [764..1803] |
|
0.0 | [1103..2143] | [690..1729] |
|
0.0 | [1105..2142] | [851..1902] |
Region A: Residues: [1-230] |
1 11 21 31 41 51 | | | | | | 1 MTANNDDDIK SPIPITNKTL SQLKRFERSP GRPSSSQGEI KRKKSRLYAA DGRPHSPLRA 60 61 RSATPTLQDQ KLFNGMDSTS LLNERLQHYT LDYVSDRAQH MKNIYDPSSR WFSRSVRPEF 120 121 PIEEFLPYKT ESHEDQAKYL CHVLVNLYIA ISSLDIQGLI SISSKDLADL KKEVDDLALK 180 181 TDLFRLSNNT AENDLLGNDI ADYDDAEGLE DELDEYFDLA GPDFNATGKI |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [231-300] |
1 11 21 31 41 51 | | | | | | 1 TAKSATIVNV NHWTNELKNC LHFDFPVALR KSLATVYYYL SLVQGQKVYR QMHVDMFERL 60 61 VSLDDDRTNF |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [301-377] |
1 11 21 31 41 51 | | | | | | 1 TELLQKQGLL LDHQIMLNFL CEFLPYPDPD YARYELSSKE DLQLFRLLLK HAHNAKPFFD 60 61 KSKESLLVDT MNFLLSS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [378-449] |
1 11 21 31 41 51 | | | | | | 1 LAPSTMMAVM PIVTSVVPYH YHIHSKIIDY FPFCYSIWSS VSANVAIDTH MYDFVGSISK 60 61 DVHNKILSSE HE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [450-554] |
1 11 21 31 41 51 | | | | | | 1 KDVVGVEFGE FGIFTDDQMT FMFNRLQGHL RTDGQIHSYS RTVKPFVYAI NGSKKDRFFE 60 61 KLVSLAKAIE TFIHPSNNGF WTKPNAKFVH AFIKSYHGRV KYEED |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [555-707] |
1 11 21 31 41 51 | | | | | | 1 ICARGVTNGI CLTSFCHEEI VEIFLNIISL GSQNKNPDIA NYYISCFAYL LELDPSNAYL 60 61 IYDKILIDLY DTLADQFINS RHRIISSLKQ FTRVIRFIVM DKLYRVHITN VLSMLVSKLD 120 121 MNDTNLTSNL INGIVSIAAF IPIQDLTGED DYI |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [708-856] |
1 11 21 31 41 51 | | | | | | 1 SFESDTLPLV QQHFYHIKCG ESSKTFRVDD ELLNNAFKAS TTVFQSMLKV YVEKIFQLVD 60 61 VDLEDSLVTK INQTTMILQE SMDDKIFNYF ASLLQRNFWS NDSFKEKDPN YELVTIPLAA 120 121 LVRRNNGLSK ELVRTLLFHI KEQIKRGAG |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [857-1034] |
1 11 21 31 41 51 | | | | | | 1 SVRSTSEIQQ RDVKLVLYLT ALNDVLRQCH ESLLEYSDEL ITFMKYLYDN VTNPPLDVIT 60 61 SIVIHSALAT LCTTEITDCR LFPEDSKIPE KDRWGGLQFD PRRFDKQHLS FQWHVPSSDE 120 121 ITLSISILES LSEYCINNVE ELMKAPRHDS EYGDMIQKYV LVMTHTLSGS SLLFDPDF |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1035-1165] |
1 11 21 31 41 51 | | | | | | 1 NKYRTQSNLS YREKLILLKN IRENNCDPQE LDIDIEQIRS GKDDEDYIES KDIEAGLNAG 60 61 VSDVVQLRDE FPDELIVDEE VVSEMPSGVN TPIAGTHGTD NSAMSSDLAF RDLDIYTCNY 120 121 YFGNTTEEKL Q |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1166-1328] |
1 11 21 31 41 51 | | | | | | 1 NPQYLQVHRV RARIGHFFHK LYVFLSTNFE NNTNMFQILL HGLKVWFTDL GQETVFNEDP 60 61 NAFIDVDFLE NVQSLSHVNE PFTRTNFAIR ANSLHQSRVL LHSTNRKASK LENLLLVDII 120 121 QLATSLYPDI YKPAQGTLVH CMKQLVGSYG VVINKIIPSL EKA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
binding | 2.96084803796407 | bayes_pls_golite062009 |
hydrolase activity | 2.62777210765927 | bayes_pls_golite062009 |
nucleic acid binding | 2.2915564382469 | bayes_pls_golite062009 |
transcription regulator activity | 1.78626120336243 | bayes_pls_golite062009 |
DNA binding | 1.62962293446832 | bayes_pls_golite062009 |
protein binding | 1.61131270705552 | bayes_pls_golite062009 |
transcription factor activity | 0.931585995872658 | bayes_pls_golite062009 |
structural molecule activity | 0.907636867485115 | bayes_pls_golite062009 |
translation regulator activity | 0.845133720454593 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 0.825554268911902 | bayes_pls_golite062009 |
translation initiation factor activity | 0.594620724124658 | bayes_pls_golite062009 |
mRNA binding | 0.328122666854777 | bayes_pls_golite062009 |
RNA binding | 0.243875756041061 | bayes_pls_golite062009 |
transcription activator activity | 0.005251231402011 | bayes_pls_golite062009 |
Region A: Residues: [1329-1412] |
1 11 21 31 41 51 | | | | | | 1 IKDHDYMKIQ VILNVLLIKK IHRKLMTDYK DIGRLIFLLI ECCRVNELEI GMYADKILTD 60 61 IVIGIKIPSS VCVISDQAFL PLAP |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1413-1588] |
1 11 21 31 41 51 | | | | | | 1 PDGTINLQVE AVKLAKKKKR EYYLSLLVDL QDKLLDKLDN EKDMGWKIRM FILRFVTQIQ 60 61 SNLESKPDKR AVFSIISQIS TKHPEIIHLV VKSLLSTCNK IISLSDYEYD ITRAYKNEFN 120 121 PSFVEILDTS TTSFPKTFTE EMNNFDNPKY FIDLRAYVGW LCWGRLMYVM SPKALK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1589-1813] |
1 11 21 31 41 51 | | | | | | 1 LNLRENELEV LKTAGHLLTR EFLRDVTMNL VQDNETRGVF SSGNVSFFSL VILLISSGFC 60 61 ELNMSDLFEL CESYYNKDDK ASMIMSVEIV AGLVCGSKFM SVSDLDKRDT FIENFLAKCL 120 121 DYELNHDAFE IWSTLAWWLP AVVDLRRSKT FFCHFINADG MFDRESDAAT HQTSKIYMLR 180 181 SILMSMEFRA PDVGKLFDEL VFDHPYDQVR QAVAKLLTTL VQNQS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1814-1982] |
1 11 21 31 41 51 | | | | | | 1 NPSISDPTTL LEAERNDPDG LGLPLKSVPE KVDAYIKKQF EIIKNLEDSV VGLNPQQFIK 60 61 TDYFYRTSTI FYWIKEMARG PNKVLLVPYL VDYVLPFLIG LVKHKDVCAL ASLDPVRLYA 120 121 GLGYMPIRKN HVAAIVDYVC SSNVALSSNQ TKLQLAFIQH FLSAELLQL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1983-2143] |
1 11 21 31 41 51 | | | | | | 1 TEEEKNKILE FVVSNLYNEQ FVEVRVRAAS ILSDIVHNWK EEQPLLSLIE RFAKGLDVNK 60 61 YTSKERQKLS KTDIKIHGNV LGLGAIISAF PYVFPLPPWI PKQLSNLSSW ARTSGMTGQA 120 121 AKNTISEFKK VRADTWKFDR ASFNTEELED LEGVLWRSYY A |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.