| Protein: | MET13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 600 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET13.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..600] | [1..600] |
|
|
0.0 | [1..590] | [1..588] |
|
|
0.0 | [1..600] | [1..584] |
|
|
0.0 | [1..590] | [1..586] |
|
|
0.0 | [1..596] | [1..580] |
|
|
0.0 | [1..590] | [1..586] |
|
|
0.0 | [1..590] | [1..586] |
|
|
0.0 | [2..596] | [67..659] |
|
Region A: Residues: [1-309] |
1 11 21 31 41 51
| | | | | |
1 MKITEKLEQH RQTSGKPTYS FEYFVPKTTQ GVQNLYDRMD RMYEASLPQF IDITWNAGGG 60
61 RLSHLSTDLV ATAQSVLGLE TCMHLTCTNM PISMIDDALE NAYHSGCQNI LALRGDPPRD 120
121 AENWTPVEGG FQYAKDLIKY IKSKYGDHFA IGVAGYPECH PELPNKDVKL DLEYLKQKID 180
181 AGGDFIITQM FYDVDNFINW CSQVRAAGMD VPIIPGIMPI TTYAAFLRRA QWGQISIPQH 240
241 FSSRLDPIKD DDELVRDIGT NLIVEMCQKL LDSGYVSHLH IYTMNLEKAP LMILERLNIL 300
301 PTESEFNAH
|
| Detection Method: |  |
| Confidence: | 94.39794 |
| Match: | 1v93A_ |
| Description: | 5,10-Methylenetetrahydrofolate Reductase from Thermus thermophilus HB8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| methylenetetrahydrofolate reductase (NADPH) activity | 3.97406471031265 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors | 3.43788898294589 | bayes_pls_golite062009 |
| oxidoreductase activity | 3.26500423104107 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | 2.35093189018748 | bayes_pls_golite062009 |
| catalytic activity | 2.15527229494088 | bayes_pls_golite062009 |
| 1-pyrroline-5-carboxylate dehydrogenase activity | 2.11575302268542 | bayes_pls_golite062009 |
| binding | 1.55766253746824 | bayes_pls_golite062009 |
| transcription regulator activity | 0.413628997019645 | bayes_pls_golite062009 |
| nucleic acid binding | 0.385543917258092 | bayes_pls_golite062009 |
| protein binding | 0.229798056306674 | bayes_pls_golite062009 |
| DNA binding | 0.214617895050106 | bayes_pls_golite062009 |
|
Region A: Residues: [310-453] |
1 11 21 31 41 51
| | | | | |
1 PLAVLPWRKS LNPKRKNEEV RPIFWKRRPY SYVARTSQWA VDEFPNGRFG DSSSPAFGDL 60
61 DLCGSDLIRQ SANKCLELWS TPTSINDVAF LVINYLNGNL KCLPWSDIPI NDEINPIKAH 120
121 LIELNQHSII TINSQPQVNG IRSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.547 | 0.824 | methylenetetrahydrofolate reductase (NADPH) activity | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
|
Region A: Residues: [454-508] |
1 11 21 31 41 51
| | | | | |
1 DKIHGWGPKD GYVYQKQYLE FMLPKTKLPK LIDTLKNNEF LTYFAIDSQG DLLSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [509-600] |
1 11 21 31 41 51
| | | | | |
1 HPDNSKSNAV TWGIFPGREI LQPTIVEKIS FLAWKEEFYH ILNEWKLNMN KYDKPHSAQF 60
61 IQSLIDDYCL VNIVDNDYIS PDDQIHSILL SL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
