| Protein: | PAC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 494 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [33..492] | [832..1246] |
|
|
0.0 | [3..492] | [999..1479] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MTNWQQQLPL TDTQKNELDK SVLRYLNWNY KQTVRHEHAQ DYESVRHAIV TLSGFLLQES 60
61 VDRQEFISNN DTSNESMVDI DELLLPKKWN SIVRLQKKII ELEQNTETLV SQIKDLNTQV 120
121 SELAQFKPTT SNGTSAHNVL KWIPRNLPSC LIN
|
| Detection Method: |  |
| Confidence: | 24.522879 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [154-494] |
1 11 21 31 41 51
| | | | | |
1 VESSVTSVKL HPNLPIVFVA TDHGKLYAFD LFNYTIPLAS LQSHTKAITS MDVLFTNYTN 60
61 SSKKNYLVIV TASKDLQIHV FKWVSEECKF QQIRSLLGHE HIVSAVKIWQ KNNDVHIASC 120
121 SRDQTVKIWD FHNGWSLKTF QPHSQWVRSI DVLGDYIISG SHDTTLRLTH WPSGNGLSVG 180
181 TGHEFPIEKV KFIHFIEDSP EIRFRTPSTD RYKNWGMQYC VSASRDRTIK IWEIPLPTLM 240
241 AHRAPIPNPT DSNFRCVLTL KGHLSWVRDI SIRGQYLFSC ADDKSVRCWD LNTGQCLHVW 300
301 EKLHTGFVNC LDLDVDFDSN VTPRQMMVTG GLDCKSNVFM R
|
| Detection Method: | |
| Confidence: | 127.39794 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dynactin binding | 7.11157019623125 | bayes_pls_golite062009 |
| dynein heavy chain binding | 6.59987903164261 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| snoRNA binding | 2.20077763915561 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.18628561734369 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| transporter activity | 1.65168247201205 | bayes_pls_golite062009 |
| nucleic acid binding | 1.40004045504145 | bayes_pls_golite062009 |
| platelet-activating factor acetyltransferase activity | 1.36229564654648 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| transcription regulator activity | 1.25687092973217 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.22384651674093 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| 0.88172763425403 | bayes_pls_golite062009 | |
| myosin heavy chain kinase activity | 0.848140419140051 | bayes_pls_golite062009 |
| DNA binding | 0.711274653406079 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.707581908546932 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
| kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
| molecular transducer activity | 0.367729389382533 | bayes_pls_golite062009 |
| signal transducer activity | 0.367729389382533 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| transcription factor activity | 0.243992994917491 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
| ligase activity | 0.20682813699621 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.161639372576406 | bayes_pls_golite062009 |
| chromatin binding | 0.145491963066342 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| myosin II binding | 0.12060669039328 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| RNA binding | 0.0914092269020899 | bayes_pls_golite062009 |
| transcription repressor activity | 0.084112683169759 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
