| Protein: | UFE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 346 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UFE1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-56 | [1..346] | [1..346] |
|
|
3.0E-45 | [64..342] | [28..278] |
|
|
5.0E-45 | [65..342] | [1..250] |
|
|
6.0E-44 | [2..342] | [1..280] |
|
|
3.0E-43 | [2..342] | [1..278] |
|
|
5.0E-43 | [2..342] | [1..278] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MMSDLTPIFR KYVAVIDDAR NEQNGIDDHV ERKQEDFGNS NETCEMFRDS FIKECARLLK 60
61 FLVELNKVIK QIEKNYLDDF NMSDAEKDEF DMECRLQIQQ YFKKFEFLEN YEMERHNLSL 120
121 KRFQSKSHRW SKILSNKNDN TKHVIHPQDI ENGVYEFRLG VLRCLNLWIK YVSSKFTTIQ 180
181 QERLILENKM NFNSTPMPTL S
|
|
Region B: Residues: [263-346] |
1 11 21 31 41 51
| | | | | |
1 KKVETINKTI LDIVNIQNEL SNHLTVQSQN INLMLNNQDD IELNIKKGNK ELRKAKRAAG 60
61 RTAKMTTYGA IIMGVFILFL DYVG
|
| Detection Method: |  |
| Confidence: | 36.522879 |
| Match: | 1dn1B_ |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| protein transporter activity | 2.305772311362 | bayes_pls_golite062009 |
| binding | 2.18404492932496 | bayes_pls_golite062009 |
| protein binding | 1.82422117934251 | bayes_pls_golite062009 |
| phosphatidic acid binding | 1.79882292156155 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| SNARE binding | 0.71459772253941 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.00476738027966683 | bayes_pls_golite062009 |
|
Region A: Residues: [202-262] |
1 11 21 31 41 51
| | | | | |
1 NNADDFSADA IDISVSQSAP VETVQDEVKH YEETISKLTQ EQLQVLETEH SELLNQKNEQ 60
61 L
|
| Detection Method: | |
| Confidence: | 36.522879 |
| Match: | 1dn1B_ |
| Description: | Syntaxin 1A N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
