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View Structure Prediction Details

Protein: YOR051C
Organism: Saccharomyces cerevisiae
Length: 412 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR051C.

Description E-value Query
Range		 Subject
Range
ETT1_YEAST - Enhancer of translation termination 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ET...
ETT1_YEAS2 - Enhancer of translation termination 1 OS=Saccharomyces cerevisiae (strain JAY291) GN=ETT1 PE=3 SV=1
YOR051C - Nuclear protein that inhibits replication of Brome mosaic virus in S. cerevisiae, which is a model s...
 4.0E-61 [1..412] [1..412]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 4.0E-61 [3..342] [1147..1518]
MYO5A_CHICK - Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
 2.0E-59 [3..342] [1148..1519]
gi|1770741, gi|1... - gi|1770741|emb|CAA69035.1| mysoin heavy chain 12 [Homo sapiens], pir||A59254 mysoin heavy chain 12, ...
 9.0E-59 [3..342] [1147..1545]
MYO5A_RAT - Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1
 6.0E-58 [3..342] [1147..1518]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
 2.0E-57 [3..342] [1146..1542]
MYO5A_MOUSE, MY5... - Myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=1, (Q99104) Myosin Va (Myosin 5A) (Dilute myosin heavy ch...
 3.0E-57 [3..342] [1147..1543]

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Predicted Domain #1
Region A:
Residues: [1-251] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRPLGLGK QSREKKRKVE SVEKKSDEPS RESTPVRSQM SVELDDDADL DDELAQLKGL  60
   61 WSKYFHSDRD DEYVLNGIVH ECDRLLRLSE EDKEIKKTLN DIFHGIYALA LSELTIFKAG 120
  121 DEEATEEKRK KDVSSFFESA IERVELGLSH FPESQFLKLV LAKIIFQRIP LEYISNLHLK 180
  181 SKDKKLDLVG QLEHGKKHFS IYENDTEFTF EILQMVNDLL DIVENFGREQ SIQEGIDSDN 240
  241 EEEEELIDIE L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1i84S_
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [252-412] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPEHPVYPLQ QSLEANYEWL RNHFDKLLDN TNTDVKIYAS IANTLGELYL KKAEEPSKVF  60
   61 LSLQYDDGGS EKVSDKEAKN AQETALKHTK KALEYLEKAK LEDDPDTWVQ VAEAYIDLGN 120
  121 LLDNESAEQE EAYKTAEEIL GKANKASHGK FQDVLDNFLQ G

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.38
Match: 1llwA
Description: Alpha subunit of glutamate synthase, C-terminal domain; Alpha subunit of glutamate synthase, central and FMN domains; Alpha subunit of glutamate synthase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.59485355201144 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle