| Protein: | DCP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 231 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..231] | [1..231] |
|
|
0.002 | [54..157] | [458..570] |
|
Region A: Residues: [1-231] |
1 11 21 31 41 51
| | | | | |
1 MTGAATAAEN SATQLEFYRK ALNFNVIGRY DPKIKQLLFH TPHASLYKWD FKKDEWNKLE 60
61 YQGVLAIYLR DVSQNTNLLP VSPQEVDIFD SQNGSNNIQV NNGSDNSNRN SSGNGNSYKS 120
121 NDSLTYNCGK TLSGKDIYNY GLIILNRINP DNFSMGIVPN SVVNKRKVFN AEEDTLNPLE 180
181 CMGVEVKDEL VIIKNLKHEV YGIWIHTVSD RQNIYELIKY LLENEPKDSF A
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| m7G(5')pppN diphosphatase activity | 7.99932341873003 | bayes_pls_golite062009 |
| RNA binding | 2.55097133772064 | bayes_pls_golite062009 |
| binding | 2.05807773136211 | bayes_pls_golite062009 |
| protein binding | 1.42524730253104 | bayes_pls_golite062009 |
| mRNA binding | 1.14723961298833 | bayes_pls_golite062009 |
| structural molecule activity | 0.748515192577617 | bayes_pls_golite062009 |
| hydrolase activity | 0.223484823985325 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0780836662661571 | bayes_pls_golite062009 |
