| Protein: | BSC6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 497 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BSC6.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-71 | [75..497] | [68..505] |
|
|
1.0E-70 | [75..497] | [68..505] |
|
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2.0E-69 | [36..486] | [73..504] |
|
|
2.0E-68 | [34..493] | [2..459] |
|
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5.0E-67 | [77..497] | [36..472] |
|
|
2.0E-66 | [72..494] | [13..440] |
|
|
4.0E-66 | [63..497] | [25..485] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MDASSVPPKV DDYGMYTTEI SHHNPIELKN LLSSSDSRRN SQDEDSLPNN TNLIKEIDW
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.570 | a.4.1 | Homeodomain-like |
| View | Download | 0.539 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.564 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.492 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.486 | a.4.1 | Homeodomain-like |
| View | Download | 0.444 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.443 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.430 | a.4.1 | Homeodomain-like |
| View | Download | 0.417 | a.4.1 | Homeodomain-like |
| View | Download | 0.413 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.391 | a.4.1 | Homeodomain-like |
| View | Download | 0.368 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.367 | a.4.1 | Homeodomain-like |
| View | Download | 0.364 | a.4.1 | Homeodomain-like |
| View | Download | 0.354 | a.159.2 | FF domain |
| View | Download | 0.335 | a.5.2 | UBA-like |
| View | Download | 0.307 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.305 | a.3.1 | Cytochrome c |
| View | Download | 0.299 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.294 | a.4.1 | Homeodomain-like |
| View | Download | 0.287 | a.3.1 | Cytochrome c |
| View | Download | 0.283 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.282 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.276 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.228 | a.64.1 | Saposin |
| View | Download | 0.225 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.219 | a.3.1 | Cytochrome c |
| View | Download | 0.218 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.218 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.214 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.214 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.206 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.203 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| binding | 0.873217664940684 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [60-497] |
1 11 21 31 41 51
| | | | | |
1 QGEKVKTYPL NYQTVPLVKL QVIACLIMFV VFGMNDQTVG ALLPTLIEYY HISRVDVSNV 60
61 FIVQLCGYVM ASLSKERLNK HFGMRGGMLL AAGLCIVFLI ILATAPSSFY VCMFCGLPLG 120
121 LGIGILDSTG NVLMGSLLVH KNELMGIMHG LYGAAAMVTP PLVSYFVEWG HWSLFFLIPL 180
181 FFSIIGMIVI FPAFKFETAS KYDYLCSVEN KESNNDVEEA GDNSLMESTK ASPGFFELLR 240
241 NPAIFLYSLY LFLYLGAEIT TGSWFFSYLL ETKSSNKVAM SYIAASFWTG LTVGRLCLGF 300
301 VTERFFENEY KASKAYAFLT LSSYTLFVLV GLINSSSVFY FVVLFFVVFC CGTFIGPLFP 360
361 NASIVALQVL PKRLHVSGVG VAVAVGGCGG AAIPYLAGVI AHTVGIQYIP LLCWIMVALF 420
421 TLEWTLYPKF IKGHEEYF
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| Detection Method: | |
| Confidence: | 56.522879 |
| Match: | 1lviA_ |
| Description: | No description for 1lviA_ was found. |
