| Protein: | GAS4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 471 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAS4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..452] | [1..452] |
|
|
0.0 | [9..435] | [5..445] |
|
|
0.0 | [2..377] | [1..370] |
|
|
0.0 | [2..377] | [1..370] |
|
|
0.0 | [2..377] | [1..370] |
|
|
0.0 | [7..413] | [4..413] |
|
Region A: Residues: [1-343] |
1 11 21 31 41 51
| | | | | |
1 MMVFSSTFIF LILELVVLCE ASVHTIQIKD KHFVDTVTGK PFFIKGVDYQ PGGSSDVSEK 60
61 QDPLSNPDAC ARDILLFQEL GINTVRIYSI NPDLNHDACM TMLAMAGIYL ILDVNSPLQN 120
121 QHLNRYEPWT TYNEVYLEHV FKVVEQFSHY NNTLGFFAGN EIVNDKRSAQ YSPAYVKELI 180
181 GTMKNYISAH SPRTIPVGYS AADDLNYRVS LSEYLECKDD DKPENSVDFY GVNSYQWCGQ 240
241 QTMQTSGYDT LVDAYRSYSK PVFFSEFGCN KVLPRQFQEI GYLFSEEMYS VFCGGLVYEF 300
301 SQEDNNYGLV EYQEDDSVQL LADFEKLKSH YQNIEFPSMK TLK
|
| Detection Method: |  |
| Confidence: | 229.920819 |
| Match: | PF03198 |
| Description: | Glycolipid anchored surface protein (GAS1) |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| glucan 1,3-beta-glucosidase activity | 4.74305379082042 | bayes_pls_golite062009 |
| beta-glucosidase activity | 4.08728799854386 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 3.82308281904462 | bayes_pls_golite062009 |
| glucosidase activity | 3.42748790579187 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 2.21061553009372 | bayes_pls_golite062009 |
| hydrolase activity | 1.33241439716102 | bayes_pls_golite062009 |
| binding | 0.519762370064533 | bayes_pls_golite062009 |
| alpha-amylase activity | 0.318549118740213 | bayes_pls_golite062009 |
| fucose binding | 0.289279546872586 | bayes_pls_golite062009 |
| hexosaminidase activity | 0.152927193173404 | bayes_pls_golite062009 |
| chitinase activity | 0.139132768318145 | bayes_pls_golite062009 |
|
Region A: Residues: [344-471] |
1 11 21 31 41 51
| | | | | |
1 ETVQMEETPS CAEDYENLKI ESKIAKNLGS SLIKKGVKVE KGKYIDIHED QLSTNVTILD 60
61 KHGDRWNGPK KIEIRQSLTL ADLEGEEQED ADEDKDDLKR KHRNSASISG PLLPLGLCLL 120
121 FFTFSLFF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.510 | d.110.4 | SNARE-like |
| View | Download | 0.454 | a.29.2 | Bromodomain |
| View | Download | 0.353 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.340 | a.7.7 | BAG domain |
| View | Download | 0.319 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.309 | d.129.4 | Cell-division protein ZipA, C-terminal domain |
| View | Download | 0.297 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.282 | a.26.1 | 4-helical cytokines |
| View | Download | 0.273 | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.235 | d.224.1 | SufE-like |
| View | Download | 0.216 | a.25.1 | Ferritin-like |
| View | Download | 0.204 | d.52.4 | YhbC-like, N-terminal domain |
