Protein: | YOL098C |
Organism: | Saccharomyces cerevisiae |
Length: | 1037 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOL098C.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1017] | [1..1017] |
|
0.0 | [10..1002] | [53..1030] |
|
0.0 | [8..1034] | [10..1027] |
|
0.0 | [15..1027] | [20..974] |
|
0.0 | [21..1022] | [26..949] |
|
0.0 | [4..1018] | [12..972] |
|
0.0 | [4..1018] | [12..971] |
|
0.0 | [10..997] | [57..958] |
Region A: Residues: [1-158] |
1 11 21 31 41 51 | | | | | | 1 MGFKKLVSFQ PDYVPQYHIT KYISERTKLQ LVHINHKTSP LVHGYFAVPT ECLNDSGAPH 60 61 TLEHLIFMGS KSYPYKGLLD TAGNLSLSNT NAWTDTDQTV YTLSSAGWKG FSKLLPAYLD 120 121 HILHPTLTDE ACLTEVYHID PENLGDKGVV FSEMEAIE |
Region B: Residues: [179-260] |
1 11 21 31 41 51 | | | | | | 1 GYRSETGGLT KNLRTLTNDE IRQFHKSLYS SDNLCVIVCG NVPTDELLTV MEEWDNKLPE 60 61 IPSNIPKKRP FLDNKLSHIP QS |
Region C: Residues: [387-419] |
1 11 21 31 41 51 | | | | | | 1 LNYEKNGESR FSSAVITDYI YGNEDGSSLV SSL |
Detection Method: | |
Confidence: | 130.221849 |
Match: | 1bccA_ |
Description: | Cytochrome bc1 core subunit 1 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
peptidase activity | 3.69244584360647 | bayes_pls_golite062009 |
peptidase activity, acting on L-amino acid peptides | 3.08483676722061 | bayes_pls_golite062009 |
endopeptidase activity | 2.95066280153013 | bayes_pls_golite062009 |
hydrolase activity | 2.42559068821325 | bayes_pls_golite062009 |
metallopeptidase activity | 2.13305051098292 | bayes_pls_golite062009 |
metalloendopeptidase activity | 1.79244321225531 | bayes_pls_golite062009 |
binding | 1.51460850438647 | bayes_pls_golite062009 |
catalytic activity | 1.30647052031202 | bayes_pls_golite062009 |
structural molecule activity | 0.389336364351523 | bayes_pls_golite062009 |
protein binding | 0.236143103582996 | bayes_pls_golite062009 |
Region A: Residues: [159-178] |
1 11 21 31 41 51 | | | | | | 1 TQGWYISGLE KQRLMFPEGS |
Region B: Residues: [261-386] |
1 11 21 31 41 51 | | | | | | 1 RDKVTESTVE FPELDESQGE LLFSWIGVPY SDFRNDLAVD VLLDYFTDSA LAVFTRELVE 60 61 IDDPMANSTD CCTDYFMRTI IDLRIQGVPT EKIAATKTKV LEILKTHTID LSRVRQVVEN 120 121 TKWEYL |
Region C: Residues: [420-498] |
1 11 21 31 41 51 | | | | | | 1 KDLSDFDALL QWSQKDWQSL LNRIFVDNKP IIVTAKPSAL MYEQLEKEKS DLIKQREAEF 60 61 DDEKKLVLLK RLNNAKNIN |
Detection Method: | |
Confidence: | 130.221849 |
Match: | 1bccA_ |
Description: | Cytochrome bc1 core subunit 1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [499-550] |
1 11 21 31 41 51 | | | | | | 1 DRPIPKSLLQ KFEIDNPSKS VEFVNTKSIA TVDSYKYNNV SDPLTKKILE TR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.339 | d.58.17 | Metal-binding domain |
View | Download | 0.394 | g.3.11 | EGF/Laminin |
View | Download | 0.375 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.492 | d.9.2 | Description not found. |
View | Download | 0.312 | d.58.17 | Metal-binding domain |
View | Download | 0.309 | a.60.1 | SAM/Pointed domain |
View | Download | 0.294 | g.3.11 | EGF/Laminin |
View | Download | 0.287 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
View | Download | 0.270 | d.9.2 | Description not found. |
View | Download | 0.261 | d.9.2 | Description not found. |
View | Download | 0.256 | g.37.1 | C2H2 and C2HC zinc fingers |
View | Download | 0.248 | b.34.2 | SH3-domain |
View | Download | 0.237 | d.9.1 | Interleukin 8-like chemokines |
View | Download | 0.231 | d.52.5 | Probable GTPase Der, C-terminal domain |
View | Download | 0.226 | g.3.11 | EGF/Laminin |
View | Download | 0.225 | g.3.11 | EGF/Laminin |
View | Download | 0.219 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
View | Download | 0.214 | d.58.7 | RNA-binding domain, RBD |
View | Download | 0.211 | a.60.2 | RuvA domain 2-like |
View | Download | 0.209 | a.60.11 | Hypothetical protein YjbJ |
View | Download | 0.205 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
View | Download | 0.204 | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
View | Download | 0.201 | d.52.1 | Alpha-lytic protease prodomain |
Region A: Residues: [551-689] |
1 11 21 31 41 51 | | | | | | 1 PDNFPLFIHL NHFPSQFIEL HFLVNSASIK DTSLLPYFNM FDELFSMPMK ILDEESNVET 60 61 MLSFEEVVAK LKSETIDAQI NQGLKGSCPD LINFKIQCRA GGYSNSVQWI KHCLFDMVFD 120 121 ENRVRILLEN YLNSIVEWK |
Region B: Residues: [708-793] |
1 11 21 31 41 51 | | | | | | 1 RSLKKSTDPL FVEAKLQEIF AEIENGNFEK EILPRIETMR KQLRANFNKF HILVLGDISK 60 61 IDDVYEPWNP LIKCLNIAHP VEKLKI |
Region C: Residues: [935-960] |
1 11 21 31 41 51 | | | | | | 1 IECGYFETAL SKYVDEFCLQ RGNNFN |
Detection Method: | |
Confidence: | 14.21 |
Match: | 1kb9A |
Description: | Cytochrome bc1 core subunit 1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [690-707] |
1 11 21 31 41 51 | | | | | | 1 RNGNVMLSSL TNRNLYSA |
Region B: Residues: [794-934] |
1 11 21 31 41 51 | | | | | | 1 PPVPRALDTI SSICRTPGEK AFIITTPASE SAYMNLITSI PFNLDYHDPE YAIVSLASEY 60 61 LECVEGPFWK GIRGAGLAYG ASMLKLCEIN SWGFNIYRGA DIIKCYEVGK QIVQDYASGA 120 121 LEFDEQLIQG AISSIINRLA T |
Region C: Residues: [961-1037] |
1 11 21 31 41 51 | | | | | | 1 ELYLERLQNV TKTDLKNAMQ KYFVNMFDSN KSVAFVSCHP AKLESVQEFF ETQGFTVEIE 60 61 ELEDDDDEID SEEDENA |
Detection Method: | |
Confidence: | 14.21 |
Match: | 1kb9A |
Description: | Cytochrome bc1 core subunit 1 |
Matching Structure (courtesy of the PDB): |