| Protein: | SIL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 421 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..421] | [1..421] |
|
|
0.0 | [57..375] | [35..392] |
|
|
7.0E-90 | [5..306] | [26..356] |
|
|
2.0E-86 | [1..306] | [22..352] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MVRILPIILS ALSSKLVAST ILHSSIHSVP SGGEIISAED LKELEISGNS ICVDNRCYPK 60
61 IFEPRHDWQP ILPGQELPGG LDIRINMDTG LKEAKLNDEK NVGDNGSHEL IVSSEDMKAS 120
121 PGDYE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| protein transporter activity | 2.17038865096656 | bayes_pls_golite062009 |
| protein binding | 2.0097220759196 | bayes_pls_golite062009 |
| binding | 1.83766472499136 | bayes_pls_golite062009 |
| transporter activity | 1.12250209220616 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.68280791022469 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.3757449438966 | bayes_pls_golite062009 |
| nucleic acid binding | 0.371883653230174 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.347277736469816 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.298901699355651 | bayes_pls_golite062009 |
| signal sequence binding | 0.279693431859311 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 0.241630311762028 | bayes_pls_golite062009 |
| hydrolase activity | 0.0962597719675237 | bayes_pls_golite062009 |
|
Region A: Residues: [126-231] |
1 11 21 31 41 51
| | | | | |
1 FSSDFKEMRN IIDSNPTLSS QDIARLEDSF DRIMEFAHDY KHGYKIITHE FALLANLSLN 60
61 ENLPLTLREL STRVITSCLR NNPPVVEFIN ESFPNFKSKI MAALSN
|
| Detection Method: | |
| Confidence: | 9.99 |
| Match: | 1ejlI |
| Description: | Importin alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [232-324] |
1 11 21 31 41 51
| | | | | |
1 LNDSNHRSSN ILIKRYLSIL NELPVTSEDL PIYSTVVLQN VYERNNKDKQ LQIKVLELIS 60
61 KILKADMYEN DDTNLILFKR NAENWSSNLQ EWA
|
| Detection Method: | |
| Confidence: | 9.99 |
| Match: | 1ejlI |
| Description: | Importin alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-421] |
1 11 21 31 41 51
| | | | | |
1 NEFQEMVQNK SIDELHTRTF FDTLYNLKKI FKSDITINKG FLNWLAQQCK ARQSNLDNGL 60
61 QERDTEQDSF DKKLIDSRHL IFGNPMAHRI KNFRDEL
|
| Detection Method: | |
| Confidence: | 9.99 |
| Match: | 1ejlI |
| Description: | Importin alpha |
| Matching Structure (courtesy of the PDB): |
|
