| Protein: | ARE2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 642 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARE2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..642] | [1..642] |
|
|
0.0 | [111..638] | [33..518] |
|
|
0.0 | [189..638] | [87..487] |
|
|
0.0 | [135..638] | [69..520] |
|
|
0.0 | [187..638] | [104..506] |
|
|
0.0 | [177..640] | [62..484] |
|
|
0.0 | [151..639] | [84..545] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MDKKKDLLEN EQFLRIQKLN AADAGKRQSI TVDDEGELYG LDTSGNSPAN EHTATTITQN 60
61 HSVVASNGDV AFIPGTATEG NTEIVTEEVI ETDDNMFKTH VKTLSSKEKA RYRQGSSNFI 120
121 SYFDDMSFEH RPS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [134-318] |
1 11 21 31 41 51
| | | | | |
1 ILDGSVNEPF KTKFVGPTLE KEIRRREKEL MAMRKNLHHR KSSPDAVDSV GKNDGAAPTT 60
61 VPTAATSETV VTVETTIISS NFSGLYVAFW MAIAFGAVKA LIDYYYQHNG SFKDSEILKF 120
121 MTTNLFTVAS VDLLMYLSTY FVVGIQYLCK WGVLKWGTTG WIFTSIYEFL FVIFYMYLTE 180
181 NILKL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.561 | 0.931 | sterol metabolic process | a.26.1 | 4-helical cytokines |
|
Region A: Residues: [319-397] |
1 11 21 31 41 51
| | | | | |
1 HWLSKIFLFL HSLVLLMKMH SFAFYNGYLW GIKEELQFSK SALAKYKDSI NDPKVIGALE 60
61 KSCEFCSFEL SSQSLSDQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.854 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
|
Region A: Residues: [398-642] |
1 11 21 31 41 51
| | | | | |
1 QKFPNNISAK SFFWFTMFPT LIYQIEYPRT KEIRWSYVLE KICAIFGTIF LMMIDAQILM 60
61 YPVAMRALAV RNSEWTGILD RLLKWVGLLV DIVPGFIVMY ILDFYLIWDA ILNCVAELTR 120
121 FGDRYFYGDW WNCVSWADFS RIWNIPVHKF LLRHVYHSSM SSFKLNKSQA TLMTFFLSSV 180
181 VHELAMYVIF KKLRFYLFFF QMLQMPLVAL TNTKFMRNRT IIGNVIFWLG ICMGPSVMCT 240
241 LYLTF
|
| Detection Method: | |
| Confidence: | 130.823909 |
| Match: | PF01800 |
| Description: | No description for PF01800 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [488-587] |
1 11 21 31 41 51
| | | | | |
1 DIVPGFIVMY ILDFYLIWDA ILNCVAELTR FGDRYFYGDW WNCVSWADFS RIWNIPVHKF 60
61 LLRHVYHSSM SSFKLNKSQA TLMTFFLSSV VHELAMYVIF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [588-642] |
1 11 21 31 41 51
| | | | | |
1 KKLRFYLFFF QMLQMPLVAL TNTKFMRNRT IIGNVIFWLG ICMGPSVMCT LYLTF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
