| Protein: | NCS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 493 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCS2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..493] | [1..493] |
|
|
3.0E-68 | [6..408] | [15..346] |
|
|
7.0E-65 | [1..382] | [1..301] |
|
|
1.0E-64 | [1..382] | [1..301] |
|
|
7.0E-64 | [1..382] | [1..301] |
|
|
4.0E-63 | [3..429] | [9..366] |
|
|
2.0E-62 | [6..405] | [5..328] |
|
|
2.0E-58 | [1..400] | [1..311] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MECQRCPASA RNPATVESRK EKFCDECFIK FVSTKQRKQM MKDEYFRNLF KVIYPFEKEG 60
61 SVSKILLPLS HSDSGSLVML DIVHDLLLEQ TKQHNNRTGF TVDVLTVFTE ENVSVIKERM 120
121 ESLINEKMSQ LNKISNIFNV HFIDVNEFFN NASEVSTFII DNENFEIFSK SKSVDDSNIL 180
181 TLKEILGKYC LNNSSRSDLI SIIKTQLIKH FAYENGYNAI MWGHSMTKLS EVIISLVVKG 240
241 KGSQIATFLD SESFDTLNNK PCKYKNLYPM KDLLSVEIES FLQIRNLAQF LINVEETNVK 300
301 PNCL
|
| Detection Method: |  |
| Confidence: | 9.88 |
| Match: | 1kh1A |
| Description: | Argininosuccinate synthetase, N-terminal domain; Argininosuccinate synthetase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity | 3.71561290487771 | bayes_pls_golite062009 |
| binding | 1.14645408412895 | bayes_pls_golite062009 |
| DNA binding | 0.992954560970173 | bayes_pls_golite062009 |
| nucleic acid binding | 0.953721017285257 | bayes_pls_golite062009 |
| catalytic activity | 0.828867994386867 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.724532065311415 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.225978168389206 | bayes_pls_golite062009 |
| transferase activity | 0.0776944314618701 | bayes_pls_golite062009 |
|
Region A: Residues: [305-493] |
1 11 21 31 41 51
| | | | | |
1 IARKSLPSLG QQKLVKNMTI NEITNKYFQD IQNDYSNIIS TVLRTADKLT QPKSSMAKPS 60
61 QCQICQSKIY TNPSNWLNRI TVTSPYPVET TEEKYLFKQW QDSKLGQSHT HYVELLNEIK 120
121 QGASNSLDVE DGDVKLCYGC LILLNTSIKD KNLVWPKVDT MDITANATNK NKELSQILDQ 180
181 FEINSDGEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
