| Protein: | SAM37 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 327 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAM37.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..327] | [1..327] |
|
|
0.005 | [44..190] | [36..166] |
|
Region A: Residues: [1-327] |
1 11 21 31 41 51
| | | | | |
1 MVKGSVHLWG KDGKASLISV DSIALVWFIK LCTSEEAKSM VAGLQIVFSN NTDLSSDGKL 60
61 PVLILDNGTK VSGYVNIVQF LHKNICTSKY EKGTDYEEDL AIVRKKDRLL EYSLLNYVDV 120
121 EISRLTDYQL FLNTKNYNEY TKKLFSKLLY FPMWYNTPLQ LRSQARENCE EIIGSLTLED 180
181 DEEFVESKAM ESASQLAQSK TFKIAHKNKI KGKQELQQVK YNLQFDNRLQ SCVSNWLAAR 240
241 KKLDDSVILS SDLLFLANLY VQLGLPDGNR IRSKLEQTFG SELLNSMSNK IDDFVHRPSN 300
301 NLEQRDPQFR EQGNVVMSLY NLACKYI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transporter activity | 1.28554239680317 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.08450741397919 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.863830764503551 | bayes_pls_golite062009 |
| binding | 0.755744666560865 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.650692022443636 | bayes_pls_golite062009 |
| catalytic activity | 0.646676412582618 | bayes_pls_golite062009 |
| nucleic acid binding | 0.477374722943518 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.416095918947547 | bayes_pls_golite062009 |
| protein binding | 0.376412693567268 | bayes_pls_golite062009 |
| transcription regulator activity | 0.374519363311304 | bayes_pls_golite062009 |
| DNA binding | 0.187513855814277 | bayes_pls_golite062009 |
