| Protein: | URA4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 364 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for URA4.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-99 | [4..359] | [63..444] |
|
|
1.0E-98 | [4..359] | [63..444] |
|
|
2.0E-98 | [4..359] | [50..412] |
|
|
3.0E-98 | [4..359] | [63..444] |
|
|
5.0E-98 | [4..359] | [63..444] |
|
|
5.0E-98 | [4..359] | [63..444] |
|
Region A: Residues: [1-364] |
1 11 21 31 41 51
| | | | | |
1 MVQEIDLGLT CDMHVHVREG AMCELVTPKI RDGGVSIAYI MPNLQPPITT LDRVIEYKKT 60
61 LQKLAPKTTF LMSFYLSKDL TPDLIHEAAQ QHAIRGVKCY PAGVTTNSAA GVDPNDFSAF 120
121 YPIFKAMQEE NLVLNLHGEK PSVHDGDKEP IHVLNAEEAF LPALKKLHND FPNLKIILEH 180
181 CTSESAIKTI EDINKNVKKA TDVKVAATLT AHHLFLTIDD WAGNPVNFCK PVAKLPNDKK 240
241 ALVKAAVSGK PYFFFGSDSA PHPVQNKANY EGVCAGVYSQ SFAIPYIAQV FEEQNALENL 300
301 KGFVSDFGIS FYEVKDSEVA SSDKAILFKK EQVIPQVISD GKDISIIPFK AGDKLSWSVR 360
361 WEPR
|
| Detection Method: |  |
| Confidence: | 444.54902 |
| Match: | 1j79A_ |
| Description: | Dihydroorotase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dihydroorotase activity | 2.32070383330692 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides | 2.20489529944693 | bayes_pls_golite062009 |
| deaminase activity | 1.79186203771221 | bayes_pls_golite062009 |
| catalytic activity | 1.70199291046899 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.60895003474033 | bayes_pls_golite062009 |
| nucleic acid binding | 0.629962267754185 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 0.573107361273483 | bayes_pls_golite062009 |
| transcription regulator activity | 0.506159010274668 | bayes_pls_golite062009 |
| DNA binding | 0.462348875991261 | bayes_pls_golite062009 |
| binding | 0.459041534336076 | bayes_pls_golite062009 |
| hydrolase activity | 0.24275130580417 | bayes_pls_golite062009 |
