| Protein: | VID22 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 901 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VID22.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..901] | [1..901] |
|
|
0.005 | [65..205] | [557..685] |
|
Region A: Residues: [1-672] |
1 11 21 31 41 51
| | | | | |
1 MRAMDTQVQS AERGLVLPPM NSTVSSATAA TTATNTDTDT DGDRDEERES LAEDGSEWVP 60
61 AYMLTRDRSR YLGHFLGVDK MLEAVKCKYC GVIIRRQGNS ISMAEASQTH LWSTHKIDPN 120
121 ANYYSGWTGV EAGSTFMVRP PLKNHQGGSA TTNSIANLLE IDEDFLKRTR EKEMALPLVQ 180
181 SLAIIIASEN LPLSFVDNTA VRLLINQNAN SLSFIDHDLI LNAIRSIAYN LDRIIQRTAL 240
241 RNNSDLSLII DKNYLLMDPT DRSNQLSNRL KNQLFEMQKI NFFSLSHSVW NNTISILSIQ 300
301 YYDDFHSQVK TLPLIIQNLH EYNNDPKLSI PAQLLKISQE LPGLQNTVIS ITLPRSQIVD 360
361 LLNVMDSQPF FPNTYTNAKN YYHNCIISII NSAILPLFGT PKSADITHPR QSSFSKEPLT 420
421 LLDSLIDLSN IDISNSIFSR INSFLDDLQS NSWQLDKFRS LCEKFGFEFV CSKFDLSRYS 480
481 TATVSLQTFL NLRPIIEEYQ SSIQIEKFNE IDFQIIDYLL ITLNSINRIL KFFTSSKSLN 540
541 FTYVLFAIMS IEKHLLSTLG SLQFQRLIAP FETFLSKIQE FKTILFSDDM NLLAMFLCPA 600
601 ILFEREVLEY SFHTISLSEI VDKLSTSIFS LLKRFLNLHT IGNVNNSHNT SNHSNMNIHT 660
661 DNQTNNINNR SG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [673-901] |
1 11 21 31 41 51
| | | | | |
1 NNSDNNDNEH DNDNDNHSNS NTPASRIDID PTGGENSVLP EQQPQNSNNN LSFGSLSDTH 60
61 HLSDSTISKE IDSIFLQIIQ EDLYDYLSTV NSIVPISYRS YCEQSNFIRD SGRFKKRIIT 120
121 EDSIIGELEQ PMNFIEELLD IHVPVCNAFW SQYLDNDAGP IIRILFKIMQ CQSSSSIRGE 180
181 YSFLNDFIPR VHPDLTQEII KIKLFNDQFV ASKVDYDLDT LQTASQYLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-412] |
1 11 21 31 41 51
| | | | | |
1 NANSLSFIDH DLILNAIRSI AYNLDRIIQR TALRNNSDLS LIIDKNYLLM DPTDRSNQLS 60
61 NRLKNQLFEM QKINFFSLSH SVWNNTISIL SIQYYDDFHS QVKTLPLIIQ NLHEYNNDPK 120
121 LSIPAQLLKI SQELPGLQNT VISITLPRSQ IVDLLNVMDS QPFFPNTYTN AKNYYHNCII 180
181 SIINSAILPL FGTPKSADIT HPRQS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [413-647] |
1 11 21 31 41 51
| | | | | |
1 SFSKEPLTLL DSLIDLSNID ISNSIFSRIN SFLDDLQSNS WQLDKFRSLC EKFGFEFVCS 60
61 KFDLSRYSTA TVSLQTFLNL RPIIEEYQSS IQIEKFNEID FQIIDYLLIT LNSINRILKF 120
121 FTSSKSLNFT YVLFAIMSIE KHLLSTLGSL QFQRLIAPFE TFLSKIQEFK TILFSDDMNL 180
181 LAMFLCPAIL FEREVLEYSF HTISLSEIVD KLSTSIFSLL KRFLNLHTIG NVNNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [648-718] |
1 11 21 31 41 51
| | | | | |
1 HNTSNHSNMN IHTDNQTNNI NNRSGNNSDN NDNEHDNDND NHSNSNTPAS RIDIDPTGGE 60
61 NSVLPEQQPQ N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [719-901] |
1 11 21 31 41 51
| | | | | |
1 SNNNLSFGSL SDTHHLSDST ISKEIDSIFL QIIQEDLYDY LSTVNSIVPI SYRSYCEQSN 60
61 FIRDSGRFKK RIITEDSIIG ELEQPMNFIE ELLDIHVPVC NAFWSQYLDN DAGPIIRILF 120
121 KIMQCQSSSS IRGEYSFLND FIPRVHPDLT QEIIKIKLFN DQFVASKVDY DLDTLQTASQ 180
181 YLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
