Protein: | VID22 |
Organism: | Saccharomyces cerevisiae |
Length: | 901 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VID22.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..901] | [1..901] |
|
0.005 | [65..205] | [557..685] |
Region A: Residues: [1-672] |
1 11 21 31 41 51 | | | | | | 1 MRAMDTQVQS AERGLVLPPM NSTVSSATAA TTATNTDTDT DGDRDEERES LAEDGSEWVP 60 61 AYMLTRDRSR YLGHFLGVDK MLEAVKCKYC GVIIRRQGNS ISMAEASQTH LWSTHKIDPN 120 121 ANYYSGWTGV EAGSTFMVRP PLKNHQGGSA TTNSIANLLE IDEDFLKRTR EKEMALPLVQ 180 181 SLAIIIASEN LPLSFVDNTA VRLLINQNAN SLSFIDHDLI LNAIRSIAYN LDRIIQRTAL 240 241 RNNSDLSLII DKNYLLMDPT DRSNQLSNRL KNQLFEMQKI NFFSLSHSVW NNTISILSIQ 300 301 YYDDFHSQVK TLPLIIQNLH EYNNDPKLSI PAQLLKISQE LPGLQNTVIS ITLPRSQIVD 360 361 LLNVMDSQPF FPNTYTNAKN YYHNCIISII NSAILPLFGT PKSADITHPR QSSFSKEPLT 420 421 LLDSLIDLSN IDISNSIFSR INSFLDDLQS NSWQLDKFRS LCEKFGFEFV CSKFDLSRYS 480 481 TATVSLQTFL NLRPIIEEYQ SSIQIEKFNE IDFQIIDYLL ITLNSINRIL KFFTSSKSLN 540 541 FTYVLFAIMS IEKHLLSTLG SLQFQRLIAP FETFLSKIQE FKTILFSDDM NLLAMFLCPA 600 601 ILFEREVLEY SFHTISLSEI VDKLSTSIFS LLKRFLNLHT IGNVNNSHNT SNHSNMNIHT 660 661 DNQTNNINNR SG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [673-901] |
1 11 21 31 41 51 | | | | | | 1 NNSDNNDNEH DNDNDNHSNS NTPASRIDID PTGGENSVLP EQQPQNSNNN LSFGSLSDTH 60 61 HLSDSTISKE IDSIFLQIIQ EDLYDYLSTV NSIVPISYRS YCEQSNFIRD SGRFKKRIIT 120 121 EDSIIGELEQ PMNFIEELLD IHVPVCNAFW SQYLDNDAGP IIRILFKIMQ CQSSSSIRGE 180 181 YSFLNDFIPR VHPDLTQEII KIKLFNDQFV ASKVDYDLDT LQTASQYLP |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [208-412] |
1 11 21 31 41 51 | | | | | | 1 NANSLSFIDH DLILNAIRSI AYNLDRIIQR TALRNNSDLS LIIDKNYLLM DPTDRSNQLS 60 61 NRLKNQLFEM QKINFFSLSH SVWNNTISIL SIQYYDDFHS QVKTLPLIIQ NLHEYNNDPK 120 121 LSIPAQLLKI SQELPGLQNT VISITLPRSQ IVDLLNVMDS QPFFPNTYTN AKNYYHNCII 180 181 SIINSAILPL FGTPKSADIT HPRQS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [413-647] |
1 11 21 31 41 51 | | | | | | 1 SFSKEPLTLL DSLIDLSNID ISNSIFSRIN SFLDDLQSNS WQLDKFRSLC EKFGFEFVCS 60 61 KFDLSRYSTA TVSLQTFLNL RPIIEEYQSS IQIEKFNEID FQIIDYLLIT LNSINRILKF 120 121 FTSSKSLNFT YVLFAIMSIE KHLLSTLGSL QFQRLIAPFE TFLSKIQEFK TILFSDDMNL 180 181 LAMFLCPAIL FEREVLEYSF HTISLSEIVD KLSTSIFSLL KRFLNLHTIG NVNNS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [648-718] |
1 11 21 31 41 51 | | | | | | 1 HNTSNHSNMN IHTDNQTNNI NNRSGNNSDN NDNEHDNDND NHSNSNTPAS RIDIDPTGGE 60 61 NSVLPEQQPQ N |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [719-901] |
1 11 21 31 41 51 | | | | | | 1 SNNNLSFGSL SDTHHLSDST ISKEIDSIFL QIIQEDLYDY LSTVNSIVPI SYRSYCEQSN 60 61 FIRDSGRFKK RIITEDSIIG ELEQPMNFIE ELLDIHVPVC NAFWSQYLDN DAGPIIRILF 120 121 KIMQCQSSSS IRGEYSFLND FIPRVHPDLT QEIIKIKLFN DQFVASKVDY DLDTLQTASQ 180 181 YLP |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.