| Protein: | TAD3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 322 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAD3.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-89 | [1..322] | [1..322] |
|
|
4.0E-73 | [1..322] | [1..324] |
|
|
2.0E-58 | [8..318] | [3..336] |
|
|
1.0E-54 | [9..321] | [6..321] |
|
|
4.0E-54 | [23..315] | [29..345] |
|
|
2.0E-53 | [23..313] | [29..345] |
|
|
1.0E-52 | [7..306] | [34..411] |
|
|
9.0E-50 | [17..306] | [27..398] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MVKKVNNPLK IDYQNGIIEN RLLQIRNFKD VNTPKLINVW SIRIDPRDSK KVIELIRNDF 60
61 QKNDPVSLRH LKRIRKDIET STLEVVLCSK EYICDEGEIN NKLKSIWVGT KKYELSDDIE 120
121 VPEFAPSTKE LNNAWSVKYW PLIWNGNPND QILNDYKID
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [160-322] |
1 11 21 31 41 51
| | | | | |
1 MQEVRNELSR ASTLSVKMAT AGKQFPMVSV FVDPSRKKDK VVAEDGRNCE NSLPIDHSVM 60
61 VGIRAVGERL REGVDEDANS YLCLDYDVYL THEPCSMCSM ALIHSRVRRV VFLTEMQRTG 120
121 SLKLTSGDGY CMNDNKQLNS TYEAFQWIGE EYPVGQVDRD VCC
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1rb7A_ |
| Description: | Yeast cytosine deaminase crystal form p212121 with sodium acetate. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.70756445127105 | bayes_pls_golite062009 |
| binding | 1.64474382695496 | bayes_pls_golite062009 |
| methyltransferase activity | 1.24697538679504 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 1.16679252289538 | bayes_pls_golite062009 |
| transferase activity | 0.771056210634777 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 0.113989053833271 | bayes_pls_golite062009 |
| protein binding | 0.072557222523031 | bayes_pls_golite062009 |
