| Protein: | CPR6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 371 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPR6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..371] | [14..370] |
|
|
0.0 | [2..371] | [14..370] |
|
|
0.0 | [3..371] | [15..370] |
|
|
0.0 | [1..371] | [1..371] |
|
|
0.0 | [1..370] | [1..360] |
|
|
0.0 | [2..371] | [10..375] |
|
|
2.0E-98 | [1..370] | [1..355] |
|
|
2.0E-96 | [2..371] | [13..383] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MTRPKTFFDI SIGGKPQGRI VFELYNDIVP KTAENFLKLC EGNAGMAKTK PDVPLSYKGS 60
61 IFHRVIKDFM CQFGDFTNFN GTGGESIYDE KFEDENFTVK HDKPFLLSMA NAGPNTNGSQ 120
121 AFITCVPTPH LDGKHVVFGE VIQGKRIVRL IENQQCDQEN NKPLRDVKID DCGVLPDDYQ 180
181 VPENAEAT
|
| Detection Method: |  |
| Confidence: | 919.218487 |
| Match: | 1ihgA_ |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.3775483906311 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.29026678196473 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| deacetylase activity | 3.49940864924766 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.01511519120932 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| signal sequence binding | 2.68460419248567 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.65866393331484 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| transcription regulator activity | 1.26149030245805 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 1.01220052237687 | bayes_pls_golite062009 |
| DNA binding | 0.9531600253493 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| hydrolase activity | 0.493806105600863 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.408539130322443 | bayes_pls_golite062009 |
| transcription factor activity | 0.374364600772076 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.322244688184474 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.286133802341887 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.230077752280113 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.105969834846946 | bayes_pls_golite062009 |
| receptor binding | 0.0640017685740477 | bayes_pls_golite062009 |
|
Region A: Residues: [189-283] |
1 11 21 31 41 51
| | | | | |
1 PTDEYGDNYE DVLKQDEKVD LKNFDTVLKA IETVKNIGTE QFKKQNYSVA LEKYVKCDKF 60
61 LKEYFPEDLE KEQIEKINQL KVSIPLNIAI CALKL
|
| Detection Method: | |
| Confidence: | 919.218487 |
| Match: | 1ihgA_ |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [284-371] |
1 11 21 31 41 51
| | | | | |
1 KDYKQVLVAS SEVLYAEAAD EKAKAKALYR RGLAYYHVND TDMALNDLEM ATTFQPNDAA 60
61 ILKAIHNTKL KRKQQNEKAK KSLSKMFS
|
| Detection Method: | |
| Confidence: | 919.218487 |
| Match: | 1ihgA_ |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
| Matching Structure (courtesy of the PDB): |
|
